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Biology
the study of living organisms
characteristics of life
1) acquire materials to produce energy 2) respond to environmental stimuli 3) maintain constant internal environment 4) contains genes 5) reproduce 6) composed of one or more cells 7)capacity to evolve 8) organized structure
3 parts of cell theory
1) every living organism is made up of cells 2) smallest structure with characteristics of life 3) all cells arise rom pre-existing cells
plasma membrane
outside covering of cells
DNA
the genetic code of all organisms
Ribosomes
produces proteins
what are found in all cells?
plasma membran DNA Ribosomes
Prokaryotic
i. no membrane, no nucleus, no compartments ii. small (micrometer wide) iii. reproduces quickly less than 25 minutes bacteria single celled
eukaryotic
i. contains a nucleus, organelles, and compartments ii. 1000X larger iii. reproduce through division animal and plant cells can live decades
Nucleus (location)
eukaryotic cells
nucleus function
contains DNA---> "brain of the cell"--> makes proteins nucleuolus-- ribosome assembly
Endoplasmic Recticulum (location)
located outside of the nucleus in eukaryotic cells
Rough ER functions
makes more membrane contains ribosomes
smooth ER functions
detoxifies chemicals in alcohol and drugs important in synthesis of lipids, including oils, phospholipids, and steroids
golgi apparatus (location)
found in most eukaryotic cells
golgi apparatus functions
processes proteins "cellular post office" recieves vesicles from ER that contian proteins and modifies those proteins
vessicles (location)
found in plant and animal cells and some bacteria cells
vessicles function
transports materials in and out of the cell and between organelles ex. proteins, water, and waste
lysosomes (location)
animal cells contain lysosomes
lysosomes functions
break down worn out cell parts destroy viruses and bacteria digest large molecules and malfunctioning organelles
mitochondria (location)
all eukaryotic cells
mitochondria functions
"powerhouse of the cell" extract energy from food molecules and stor it in the bonds of ATP
cytoskeleton (location)
found in eukaryotic cells
cytoskeleton function
shape---> provide track for organelles aid in cellular movement strengthen cell cell division
chloroplast (location)
found in plant cells
Chloroplast function
site of photosynthesis
central vacuole (location)
plant cells and sometime in animal cells
central vacuole function
plant: storage, provides support animal: storage, helps digest food
cell wall (location)
in only plant cells
cell wall function
protective layer support
animal cells vs. plant cells
animal: round shape, multiple small vacuoles, only cell membrane Plant: square shape, one large vacuole, cell membrane and cell wall
elements
"pure" only one type of atom
atoms
smallest unit of matterp---> smalles unit in an element
molecules
1 type of element part of a compound ex; H2 & O
compounds
combineing two differbnt elemental atoms ex: H2O
protons
(+) found in nucleus
neutrons
(neutral) found in nucleus
electrons
(-) negative charge found in electron cloud/ shells
how to calculate the number of protons
the atomic # is the number of protons and number of electrons`
how to calculate the number of neutrons
protons + neutrons = atomic mass
how to calculate the number of electrons
atomic # is number of electrons and protons
How to calculate the number of electrons in each shell surrounding the nucleus
first shell has 2e- and second and all outer shells have 8e-
ionic bond
mutual attraction between atoms that have gained or lost electrons---> ions of opposite charges
covalent bonds
electrons are shared between atoms
polar molecules
electrons shared not equal therefore atoms become slightly charged?
nonpolar molecules
electrons shared equally and pull is equal
acid
gives away/ contributes hydrogen ions more H+ 0-7
base
recieves/ accepts hydrogen ions more OH- 7-14
pH scale
neural 7 0-7 acid 7-14 base
buffer
weak acid or base substance that is used to neutralize a substance are important, because they control the pH tightly
organic molecules
contain a carbon backbone
inorganic molecule
molecules that do no have carbon
monomer
a subunit of a polymer found in organisms bonded together by dehydration where water is lost
polymer
a chain of monomers broken apart by hydrolysis where water is added
Carbohydrates
monomer: monosaccharides (sugar) polymer: polysaccharide---> 3 or more sugars linked together functions: energy storage and structure
Lipids
hydrophobic monomer: fatty acid polymer: tryglicerides
Saturated
when the fatty acid tails do not contain an double covalent bonds therefore have no kinks
unsaturated
contains multiple double covalent bonds and are kinky
phosopholipids
have a polar head and fatty acid tails the tails are hydrophobic and the heads are hydrophilic
proteins
monomer: amino acid---> linked together by dehydration (peptide bonds) Polymer: cellulose
primary structure
amino acids forming polypeptide chains
secondary stucture
coiling or folding of chain boned with a hydrogen bond
tertiary stucture
3-D shape of polypeptide
quaternary stucture
results from association of two or more polypeptide chains
protein functions
structure enzymes (responosible for chemical reactions) receptors transport antibodies
nucleic acids
monomer: nucleotides---> composed of sugar, phosphate, and nitrogenous base polymer: RNA and DNA serve as blueprint for proteins and thus control the life of a cell
nitrogenous bases
Adenine Thymine--> in RNA it is uracil Citosine Guanine
DNA
sugar: deoxyribose nitrogenous bases: A,T, C, G structure: double stranded helix function: long term info storage
RNA
sugar: ribose nitrogenous bases: A, U, C, G structure: single strand function: short term storage, production of proteins
plasma membrane
organize the chemical activites and provide structural order selectively permeable- control the flow of substances into or out of a cell
lipid bilayer
membrane is made of this: it has a hydrophilic head and 2 hydrophobic tails
fluid mosaic
proteins and other molecules embedded in a phospholipid bilayer proteins may be interal or periperal cholesterol is found in animal cells
glycocalyx
cell- to-cell regcognition, adhesion between cells, and reception of signal molecules provide "cellular fingerprint"
functinos of proteins in membrane
enzyme receptor for chemical messages transport-- move substances aross the membrane
permeability of the plasma membrane
concentration gradient- move from high concentration to low non charged molecules and small molecules pass right through
passive transport
move accross the concentration gradient cell does no work
facilitated diffusion
transport proteins provide passage across the membrane 2 molecules move together across membrane
osmosis
diffusion of water across a membrane: moves from low solute concentration to one of higher solute concentration
cells in isotonic solution
animal cells: normal plant cells: limp
hypotonic solution
animal cells: lysed--> cell breaking down plant cells: turgid--> swell osmosis: swell
hypertonic solution
animal cell: shriveled plant cell: shriveled osmosis: shrink
active transport
expend energy may move against concentration gradient ATP becomes ADP---> protein changes shape--> phospate is added back to make ATP agina and protein returns to normal shape
exocytosis
vesicle fuses with the membrane and expels content
endocytosis
membrane encloses material from the ouside can occur in three ways: phagocytosis pinocytosis receoptor- mediated endocytosis
phagocytosis
"cell eating"
pinocytosis
"cell drinking"
receptor- mediated endocytosis
contains a coated vesicle
1st law of thermodynamics
energy can not be created or distroyed
2nd law of thermodynamics
as energy is converted it is inefficient and energy maybe lost
exogernic reactions
start off with more energy in reactiant than in product---> energy is lost
endergonic reactions
energy is gained
enzyme
funtions as a catalyst-- speeds up reaction in a cell
thermodynamics
field of science focussing on converting substances from one form to another
substrates
(reactant) tends to have a lot of energy--> fits into an active site of an enzyme
coupled reactions
one chemical reaction may occur to allow for another reaction ot take place
activation energy
in different reactions, it takes energy to get more energy. the higher the activation energy the less likely a reaction is to occur
(protein) catalyst
redces the amount of activation energy needed for chemical reactions to take place
active site
the part of an enzyme where a substrate attaches
functions of an enzyme
responsible for specific chemical reactions reacts with particular substrates provide shape not altered in chemical reactions
denaturation
shape is altered
effect of substrate concentration on reaction rate
the reaction rate plateus
effect of pH on reaction rate
starts to decline after a pH7
effect of temperature on reaction rate
starts to decline after 40 degrees celsius
non competitive inhibitor
does not enter active site--> binds to enzyme elsewhere and changes the shape of the enzyme so the substrate can't attach
competitive inhibitor
reduces an enzymes' productivity by blocking substrates from entering the active site
feedback inhibition
metabolic reaction is blocked by its own product
coenzymes
an organic molecule serving as a cofactor
cofactor
a nonprotein molecule or ion that is required for the proper funciton of an enzyme

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