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BIO 101: EXAM 1

Biology
the study of living organisms
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characteristics of life
1) acquire materials to produce energy 2) respond to environmental stimuli 3) maintain constant internal environment 4) contains genes 5) reproduce 6) composed of one or more cells 7)capacity to evolve 8) organized structure
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3 parts of cell theory
1) every living organism is made up of cells 2) smallest structure with characteristics of life 3) all cells arise rom pre-existing cells
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plasma membrane
outside covering of cells
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DNA
the genetic code of all organisms
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Ribosomes
produces proteins
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what are found in all cells?
plasma membran DNA Ribosomes
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Prokaryotic
i. no membrane, no nucleus, no compartments ii. small (micrometer wide) iii. reproduces quickly less than 25 minutes bacteria single celled
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eukaryotic
i. contains a nucleus, organelles, and compartments ii. 1000X larger iii. reproduce through division animal and plant cells can live decades
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Nucleus (location)
eukaryotic cells
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nucleus function
contains DNA---> "brain of the cell"--> makes proteins nucleuolus-- ribosome assembly
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Endoplasmic Recticulum (location)
located outside of the nucleus in eukaryotic cells
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Rough ER functions
makes more membrane contains ribosomes
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smooth ER functions
detoxifies chemicals in alcohol and drugs important in synthesis of lipids, including oils, phospholipids, and steroids
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golgi apparatus (location)
found in most eukaryotic cells
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golgi apparatus functions
processes proteins "cellular post office" recieves vesicles from ER that contian proteins and modifies those proteins
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vessicles (location)
found in plant and animal cells and some bacteria cells
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vessicles function
transports materials in and out of the cell and between organelles ex. proteins, water, and waste
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lysosomes (location)
animal cells contain lysosomes
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lysosomes functions
break down worn out cell parts destroy viruses and bacteria digest large molecules and malfunctioning organelles
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mitochondria (location)
all eukaryotic cells
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mitochondria functions
"powerhouse of the cell" extract energy from food molecules and stor it in the bonds of ATP
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cytoskeleton (location)
found in eukaryotic cells
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cytoskeleton function
shape---> provide track for organelles aid in cellular movement strengthen cell cell division
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chloroplast (location)
found in plant cells
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Chloroplast function
site of photosynthesis
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central vacuole (location)
plant cells and sometime in animal cells
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central vacuole function
plant: storage, provides support animal: storage, helps digest food
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cell wall (location)
in only plant cells
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cell wall function
protective layer support
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animal cells vs. plant cells
animal: round shape, multiple small vacuoles, only cell membrane Plant: square shape, one large vacuole, cell membrane and cell wall
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elements
"pure" only one type of atom
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atoms
smallest unit of matterp---> smalles unit in an element
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molecules
1 type of element part of a compound ex; H2 & O
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compounds
combineing two differbnt elemental atoms ex: H2O
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protons
(+) found in nucleus
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neutrons
(neutral) found in nucleus
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electrons
(-) negative charge found in electron cloud/ shells
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how to calculate the number of protons
the atomic # is the number of protons and number of electrons`
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how to calculate the number of neutrons
protons + neutrons = atomic mass
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how to calculate the number of electrons
atomic # is number of electrons and protons
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How to calculate the number of electrons in each shell surrounding the nucleus
first shell has 2e- and second and all outer shells have 8e-
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ionic bond
mutual attraction between atoms that have gained or lost electrons---> ions of opposite charges
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covalent bonds
electrons are shared between atoms
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polar molecules
electrons shared not equal therefore atoms become slightly charged?
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nonpolar molecules
electrons shared equally and pull is equal
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acid
gives away/ contributes hydrogen ions more H+ 0-7
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base
recieves/ accepts hydrogen ions more OH- 7-14
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pH scale
neural 7 0-7 acid 7-14 base
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buffer
weak acid or base substance that is used to neutralize a substance are important, because they control the pH tightly
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organic molecules
contain a carbon backbone
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inorganic molecule
molecules that do no have carbon
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monomer
a subunit of a polymer found in organisms bonded together by dehydration where water is lost
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polymer
a chain of monomers broken apart by hydrolysis where water is added
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Carbohydrates
monomer: monosaccharides (sugar) polymer: polysaccharide---> 3 or more sugars linked together functions: energy storage and structure
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Lipids
hydrophobic monomer: fatty acid polymer: tryglicerides
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Saturated
when the fatty acid tails do not contain an double covalent bonds therefore have no kinks
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unsaturated
contains multiple double covalent bonds and are kinky
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phosopholipids
have a polar head and fatty acid tails the tails are hydrophobic and the heads are hydrophilic
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proteins
monomer: amino acid---> linked together by dehydration (peptide bonds) Polymer: cellulose
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primary structure
amino acids forming polypeptide chains
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secondary stucture
coiling or folding of chain boned with a hydrogen bond
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tertiary stucture
3-D shape of polypeptide
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quaternary stucture
results from association of two or more polypeptide chains
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protein functions
structure enzymes (responosible for chemical reactions) receptors transport antibodies
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nucleic acids
monomer: nucleotides---> composed of sugar, phosphate, and nitrogenous base polymer: RNA and DNA serve as blueprint for proteins and thus control the life of a cell
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nitrogenous bases
Adenine Thymine--> in RNA it is uracil Citosine Guanine
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DNA
sugar: deoxyribose nitrogenous bases: A,T, C, G structure: double stranded helix function: long term info storage
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RNA
sugar: ribose nitrogenous bases: A, U, C, G structure: single strand function: short term storage, production of proteins
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plasma membrane
organize the chemical activites and provide structural order selectively permeable- control the flow of substances into or out of a cell
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lipid bilayer
membrane is made of this: it has a hydrophilic head and 2 hydrophobic tails
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fluid mosaic
proteins and other molecules embedded in a phospholipid bilayer proteins may be interal or periperal cholesterol is found in animal cells
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glycocalyx
cell- to-cell regcognition, adhesion between cells, and reception of signal molecules provide "cellular fingerprint"
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functinos of proteins in membrane
enzyme receptor for chemical messages transport-- move substances aross the membrane
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permeability of the plasma membrane
concentration gradient- move from high concentration to low non charged molecules and small molecules pass right through
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passive transport
move accross the concentration gradient cell does no work
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facilitated diffusion
transport proteins provide passage across the membrane 2 molecules move together across membrane
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osmosis
diffusion of water across a membrane: moves from low solute concentration to one of higher solute concentration
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cells in isotonic solution
animal cells: normal plant cells: limp
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hypotonic solution
animal cells: lysed--> cell breaking down plant cells: turgid--> swell osmosis: swell
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hypertonic solution
animal cell: shriveled plant cell: shriveled osmosis: shrink
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active transport
expend energy may move against concentration gradient ATP becomes ADP---> protein changes shape--> phospate is added back to make ATP agina and protein returns to normal shape
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exocytosis
vesicle fuses with the membrane and expels content
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endocytosis
membrane encloses material from the ouside can occur in three ways: phagocytosis pinocytosis receoptor- mediated endocytosis
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phagocytosis
"cell eating"
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pinocytosis
"cell drinking"
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receptor- mediated endocytosis
contains a coated vesicle
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1st law of thermodynamics
energy can not be created or distroyed
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2nd law of thermodynamics
as energy is converted it is inefficient and energy maybe lost
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exogernic reactions
start off with more energy in reactiant than in product---> energy is lost
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endergonic reactions
energy is gained
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enzyme
funtions as a catalyst-- speeds up reaction in a cell
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thermodynamics
field of science focussing on converting substances from one form to another
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substrates
(reactant) tends to have a lot of energy--> fits into an active site of an enzyme
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coupled reactions
one chemical reaction may occur to allow for another reaction ot take place
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activation energy
in different reactions, it takes energy to get more energy. the higher the activation energy the less likely a reaction is to occur
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(protein) catalyst
redces the amount of activation energy needed for chemical reactions to take place
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active site
the part of an enzyme where a substrate attaches
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functions of an enzyme
responsible for specific chemical reactions reacts with particular substrates provide shape not altered in chemical reactions
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denaturation
shape is altered
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effect of substrate concentration on reaction rate
the reaction rate plateus
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effect of pH on reaction rate
starts to decline after a pH7
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effect of temperature on reaction rate
starts to decline after 40 degrees celsius
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non competitive inhibitor
does not enter active site--> binds to enzyme elsewhere and changes the shape of the enzyme so the substrate can't attach
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competitive inhibitor
reduces an enzymes' productivity by blocking substrates from entering the active site
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feedback inhibition
metabolic reaction is blocked by its own product
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coenzymes
an organic molecule serving as a cofactor
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cofactor
a nonprotein molecule or ion that is required for the proper funciton of an enzyme
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