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UT BIO 326R - Phylogenetic Tree and Bacteria Structure
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BIO 326R 1st Edition Lecture 2Outline of Last Lecture I. Earth Historya. Earth formsi. Meteorites1. Isotope ratiosb. Life beginsi. Fossil records1. Stromatolites2. C12/C13 ratiosc. Great Oxidation Eventd. Evolution of eukaryotese. Animals arrivedf. Homosapiens arrivedII. History of Microbiologya. Leuwenhoeki. Bacteria under a microscopeb. Pasteuri. Swan neck flask1. Spontaneous generationc. RediOutline of Current Lecture I. Phylogenetic Treea. Bacteriab. Archaeac. EukaryeaII. Bacteria traitsa. Sizei. ShapeThese notes represent a detailed interpretation of the professor’s lecture. GradeBuddy is best used as a supplement to your own notes, not as a substitute.ii. Surface areaiii. Doubling timeb. Volumec. ProteinIII. Bacterial Cell Structurea. Cytoplasmi. Cytosol1. Ribosomes2. Nucleoid3. Ionsii. Viscosityb. Cell membranei. Phospholipid membrane1. Phospholipid structure2. Function of membranea. Permeability3. Sterol-lite moleculesa. Fluidityii. Protection1. Gram negative2. Gram positiveCurrent Lecture- Phylogenetic Tree: Three Domains of Lifeo Bacteria, archaea, eukarea Previously, bacteria and archaea were lumped together, but they are very different Archaea and eukaryotes share similar methods of transcription Some eukaryotes are microbes- Microbe= single celled with nucleuso Ex: parasites and fungi- Bacteriao Size Average: 1-4 microns- Largest: 750 micronso Thiomargaritao Epulopiscium Gives birth to offspringo Volume Average: 10^-15 literso Protein 2.5 million needed to make bacteriao Benefit to being small? Shape- Cocci, bacilli, spiralo Cocci volume ratio: SA/V= 3/r Smaller radius scales to larger ratio or surface area Surface area- Bacteria grow by absorbing and diffusing nutrients from outside  Doubling time- 9-10 minutes in clostridum- 25-30 minutes in E. Colio Bacterial Cell Structure Cytoplasm= intracellular milieu contained within the cell membrane- Cytosol= liquid portion of cytoplasmo 80% watero Ribosomes Clustered in cytosolo Nucleoid= where DNA is stored Chromosome of E. Coli is 1000 times longer than the cell Purified DNA diluted 1/10 is a gel- In most bacteria, but not E. Colio Ions Exist in a high concentration in water- 300 microns 250 microns potassium 1 micron glucose- Viscosity of cytoplasmo Measured by rate of diffusion The longer diffusion takes, the more viscous the cytoplasmo .00-800 times slower than water 10 times slower in eukaryoteso Bacteria viscosity is between olive oil and glycerin Cell membrane- Phospholipid membraneo 8nm thicko Van der waals interaction between hydrophobic regions of phospholipids, no watero Hydrophilic region on outside, towards water - 50-70% membrane is protein- Permeabilityo Small, uncharged molecules, gases (O2) can pass freelyo Glucose, amino acids, ions, other large or charged molecules require transporters Transport proteins are highly specific and span the membrane- Fluid mosaic modelo Membrane is not statico Proteins and phospholipids move around- Functiono Permeability barriero Proton motive force Establishes a gradient to do worko Protection Bacteria live as a single cell alone Gram negative and gram positive- Viscosityo Viscous as olive oil- Sterol-lite molecules= hopenoidso Cholesterol-like molecules that, like cholesterol, control fluidityo Low temperature, less fluid, cell makes more hopenoids to keep


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UT BIO 326R - Phylogenetic Tree and Bacteria Structure

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