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Systematics
is the scientific study of the diversity of organisms and their evolutionary relationships
Taxonomy
is the science of naming, describing, and classifying organisms
classification
means arranging organisms into groups based on similarities that reflect evolutionary relationships among lineages
The binomial system of nomenclature
is classification in which each species is assigned a unique two part name
Genus-
closely related species
taxon
is a formal grouping of organisms at any given level
Kingdom prokaryotae
made to accomadate bacteria which are different than all organisms
cladogram
is one of these trees but to illustrate evolutionary relationship between groups of organisms
Domain
is based on fundamental molecular differences among the bacteria, archaea, and eukaryotes
Horizontal Gene Transfer
is when gene swap from two taxon’s of related organisms
Phylogen
(“production of phyla”) is the evolutionary history of a group of organisms from a common ancestor
homology
refers to the prescence, in 2 or more species, of a structure derived from a recent ancestor
Convergent Evolution
is independent evolution of similar structures in distantly related organisms
Reversal Homology
is when a trait reverts to its ancestral state
Plesiomorphies
or shared ancestral characters are features that were present in ancestor and remain present in descendants
Synapormorphies
or shared derived characters are the independent evolution of traits
Molecular Systematics
focuses on molecular structure to clarify evolutionary relationships
Molecular Clocks
is what specific macromolecules in DNA are referred to because they provide life span
Monophyletic Taxon
includes several ancestral species and all descendants
Sister Taxa
or sister groups share recent common ancestor with one another
Paraphyletic taxon
group that contains common ancestor and some but not all descendants
Polyphyletic Group
consists of several evolutionary lines that don’t share recent ancestor
Cladistics
or phylogentic systematics is approach where derived characteristics are analyzed and used to infer other relationships
root
indicates most recent ancestor
Outgroup analysis
is a method for estimating which attributes are shared in group of organisms
Outgroup
is a taxon that is considered to have diverged earlier than the ingroups
Phylogram
provides information about relative number of mutations that occur through lineage
Ultrametric Tree
is rooted and the tips are equal distant from root
Maximum likelihood
is also used especially in molecular data
virus
or virion is a tiny infectious particle consisting of a nucleic acid core (genetic material) surrounded by a protein coat called a capsid
The Lytic Reproductive Cycle
is cycle when virus destroys host cells
Attachment or absorption-
virus attaches to receptors on host cells, ensures infection of specific host
Penetration-
virus penetrates plasma membrane and moves to cytoplasm.
Replication and Synthesis-
viral genome contains info to produce new viruses.
Assembly-
new synthesized viral components are assembled into viruses
Release-
new viruses are released from cell.
Restriction Enzymes
are enzymes that cut up foreign DNA of the phage
Temperate Viruses
don’t always destroy host
Retrovirus
are RNA viruses that have a DNA polymerase called Reverse Transcriptase which is used to transcribe the RNA genome into a DNA intermediate
HIV (human Immunodefiency Virus)
is a retrovirus
A Viroid
is a infective agent that is smaller than a virus and has no protein coat
A Prion
is a protein particle and infective agent called “proteinaceous infectious particle”
Cocci
occur singly in some species and in groups of independent cells
Bacilli
occur as single rods or long chains
Horizontal Gene Transfer
occurs when organism transfers genetic material to another organism that is not offspring
Transformation
a bacterial cell takes up fragments of foreign DNA released by another bacterium
Transduction
is another gene transfer method where a phage carries bacterial genes from one bacteria into another
Conjugation
is where two cells of different mating types come together and genetic material is transferred
Donor cells-
F+, recipient cells F- are cells in Ecoli
phototrophs
(get energy from capturing light)
Methanogens
are methane producers that are large diverse group that inhabit oxygen free environments
Extreme Halophiles
are heterotrophs that live in saturated brine solutions like salt ponds
Extreme Thermophiles
require high temperature for growth nad inhabit acidic environments
Symbiosis
is the relationship between two members of two or more species
Mutualism
is a symbiotic relationship in which both partners benefit
Commensalism
where one partner benefits and the other is neither harmed nor helped
Parasitism
one partner lives on or in the other
parasite
benefits and the host is harmed
Microbiota
is a population of microorganisms that are harmless symbiotic prokaryotes
Koch’s Postulates
is used to demonstrate that a specific pathogen causes a specific disease symptom
Exotoxins
are strong poisons that some bacteria produce that leak out when cell is destroyed releasing disease
Endotoxin
are not secreted by pathogens but are components of the cell wall of most gran negative bacteria
R Factors
are plasmids that have genes for antibiotic resistance
Biomediation
is a process in which a contaminated site is exposed to microorganisms that break down the toxins, leaving behind harmless metabolic products like carbon dioxide and chlorides
Protists
are unicellular, colonial, or simple multicellular organisms that have a eukaryotic cell organization
Ultrastructure
is the fine details of cell structure revealed by electron microscopy
Monophyletic
taxa have a common ancestor
Zooflagellates
are mostly heterotrophic, unicellelular organisms with spherical or elongated bodies
excavates
are endosymbionts and live in anoxic (without oxygen) environments
Trichonymphs
are specialized excavates with hundreds of flagella that live in the guts of termites
Discicristates
are zooflagellates named for their disc shape cristae
euglenoids
are unicellular flagellates and a third of them are photosynthetic
Trypanosomes
are colorless discicristates, many of which are parasitic and cause disease
Ciliates
are one of the most complex eukaryotic cells
Dinoflagellates
are unicellular and have 2 flagella, they are photosynthetic and have chlorophyll carotenoids including fucoxanthin , a yellow cartenoid
Apicomplexans
are a large group of parasitic, spore forming alveolates, some which cause diease in humans
Heterokonts
include water molds, diatoms, golden algae, and brown algae
Water Molds
were once classified as fungi, both have a body called a mycelium that grows over organic material.
Diatoms
are unicellular algae, there are 2 types; one with radial symmetry and other with bilateral symmetry
Golden algae
are found in both fresh and marine environments
Brown Algae
include the giants of the protists kingdom, they are largest most complex of all algae, called kelps
Monophyletic group
of plants include red algae and green algae
Red algae
is multicellular, body is interwoven filaments
Green algae
have pigments, energy reserve products, and cell walls
Anisogamous
sexual reproduction involves the fusion of 2 gamates of different sizes
Cercozoa
are amoeboid cells that often have hard outer shells called tests through which cytoplasmic projections extend
Foraminiferans
are marine cercozoa that produce elaborate tests
Actinopods
are marine plankton cercozoa with long cytoplasmic projections called axopods that protrude through pores in shell
Amoebozoa
produce temporary cytoplasmic projections called pseudopodia (false foot) at some point in life cycle
Amoebas
are unicellular amoebozoa are found in soil, fresh water, the ocean and other organisms
Cellular slime molds
are amoebozoa close to amebas
Opisthokonts
are monophyletic group that includes members of 3 kingdoms: protista, fungi, animalia
Mycologists
are biologists who study fungi, identified 2 types based on body plan: yeats and molds
Coenocytic
fungi lack septa
Sporangia
are structures in which spores are produced
Conidiophores
are specialized hyphae that produce asexual spores called conidia
Fungi
are eukaryotic heterotrophs that secrete digestive enzymes to digest food
Perforated septa
, or cross walls, divide the hyphae into individual cells
Karyogamy,
fusion of nuclei, takes place in the hyphal tip and results in a diplod (2n) zygote nucleus
Chytrids
or chytridiomycetes produce flagellate cells at some stage in life cycle
Zygomycetes
, like black bread mold, form haploid thallus that produces both asexual spores and sexual spores
Asexual
germinate to make new thalli
Sexual,
2 different haploid mating types (PAGE 578 READ)
Gametangia
are the sex organs of most multicellelar fungus, algae are unicellellar
In plants
the fertilized egg develops into a multicellular embryo (young plant) within female genetalia
Alternation of generations
is the plant life cycle in which they psend part of life in haploid gamete generation and other half in diploid sporophyte generation
Ferns
are most diverse group, consist of rhizome that bears fronds and true roots
Whisk ferns
have dichotomously branching rhizomes and erect stems, lack true roots
Horsetails
have roots, rhizomes, aerial stems that are hollow and jointed and leaved that are reduced megaphylls
Homospory
is the production of one kind of spore, is most common bryophyte
Heterospory
is the production of 2 kinds of spores (micro and mega spores) and occurs in certain club mosses
Conifers-
is largest phylum and are wooden plants that bear needles and produce seeds in cones
Cycads-
are palm and fern like in appearance
Ginkgo bilboa-
is a deciduous tree, in which its female ginkgo produces flashy seeds directly from branches
Gnetophytes-
share number of traits with angiosperms
Flowering plants
or angiosperms, make phylum of vascular plants that produce flowers and seeds enclosed in a fruit (most successful group)
Monocots
have floral parts in threes and their seeds each contain 1 cotyledon , the nutritive tissue in their mature seeds is endosperm
Eudicots
usually have floral parts in 4 or 5’s and seeds contain 2 cotyledons
Annuals
are herbaceous plants that grow, reproduce, and die in 1 year or less
Biennials
take 2 years to complete life cycle
Perennials
are woody plants that a potential to live 2 or more years
Dormancy
is when organism reduces metabolic rate to a minimum to survive bad conditions
woody perennials are deciduous
where they shed their leaves before winter to produce new stems and new leaves later
Root system
is underground and gets water and minerals for plant, also keep plant in place
Shoot system
is aerial and gets sunlight and exchanged gases like co2 and oxygen
Ground tissue system
consists of 3 tissues
Parenchyma
tissue is composed of living parenchyma cells that have primary cell walls
Collenchyma
tissue consists of collenchyma cells with unevenly thickened primary cell walls, tissue provides structural support
Sclerenchyma
tissue is composed of cells sclereids or fibers that both have primary cell walls and secondary cell walls
Vascular tissue system
conducts materials throughout plant body and provides support
Sieve tube elements
are conducting cells of phloem
Dermal tissue system
is outer protective covering of plant body
Trichomes
are outgrowths or hairs that occure in many sizes and have variety of functions
Periderm
is complex tissue that covers woody parts of plant
Primary
is increased in stem or root growth
Secondary
is increase in stem or root girth only occurs in long cylinders of meristematic cells through length of older stems or roots
Stomata
are small pores in epidermis that permit gass exchange during photosynthesis
Mesophyll
consists of photosynthetic parenchyma cells.
Monocot
leaves have parallel venation where eudicot have netted venation
Blue light
which is a component of sunlight, triggers activation of proton pumps located in guard cell of plasma membrane
Transpiration
is the loss of water vapor from aerial parts of plants, occurs primarily in stomata
Guttation
is the release of liquid water from leaves
Leaf abscission
is loss of leaves that occurs as winter approaches or at beginning of dry period
Abscission zone
develops where the petiole detaches from the stem
Spines
are leaves adapted to deter herbivores
Tendrils
are modified for grasping and holding other structures (support weak stems)
Bud scales
are modified to protect delicate meristematic tissue or dormant buds
Bulbs
are short underground stems with fleshy leaves specialized for storage
Buds
are underdeveloped embryonic shoots
Terminal buds
are located at tip of stem where as axillary buds (lateral buds) are located in leaf axils
Node
is the area on stem where leaf is attached
Leaf scar
shows where each leaf was attached to stem
Bundle scars
are areas within leaf scar where vascular tissue extended from stem to leaf
Lenticels
are sites of loosely arranged cells that allow oxygen to diffuse into interior of woody stem
Vascular cambium
is lateral meristem that produces secondary xylem (wood) and secondary phloem (inner bark)
Secondary growth
(production of secondary tissues, wood, and bark) occurs in some flowering plants and all cone bearing gymnosperms
Water potential
is a measure of free energy of water
Tension cohesion model
explains that the evaporative pull of transpiration causes tension at top of plant
Root pressue
, caused by movement of water into roots from soil as result of active absorption of mineral ions from the soil explains rise of water in smaller plants (particulary with wet soil)
Taproot
system has one main root from which roots extend from
Fibrous root
has several adventitious roots of the same size developing from the end of the stem
Epidermis
protects the root, root hairs , are short lived extensions of epidermal cells, aid in absorption of water and minerals
Cortex
consists of cells that store starch.
Endodermis
is innermost layer of cortex which regulates movement of water and minerals into root xylem
Pericycle
gives rise to lateral roots and lateral meristems
Xylem
conducts water and minerals
Phloem
conduscts sugar
Cork cambium
produces periderm (outer bark)
Prop roots
develop from branches or a vertical stem to grow downward into soil to help support certain plants
Buttress roots
are swollen bases or braces that support certain tropical rainforest trees that have shallow root system
Pneumatophores
are aerial “breathing” roots that may assist in getting oxygen to submerged roots
Mycorrhizae
are mutually beneficial associations between roots and soil fungi
Root nodules
are swellings that develop on roots of leguminous plants and house millions of rhixobia (nitrogen bacteria)
CATIONS
, positively charged mineral ions, are attracted and reversibly bound to clay particle which have a predominatly negative charges on outer surfaces
cation exchange
roots secrete protons which are exchanged for other positively charged minerals ions freeing them into the soil water to be absorbed by roots
Micronutrients
are 9 of the elements: sodium, zinc, chlorine, iron, boran, magganese, copper, nickel, and molybdenum
Soil erosion
is the removal of soil by acts of agents such as water and wind
Sepals
cover and protect the flower parts when it is in bud
Petals
play role in attracting animal pollinators to flower
Stamens
produce pollen grains
Carpel
is the female reproductive unit
A Pistil
is made of a single carpel or group of fused carpels
Stigma
where pollen and grain land
Style
through which the pollem tubes grow
Ovary
which contains one or more vacuoles
egg and 2 polar nuclei
, along with other nonpolar nuclei are formed into a ovule
Insect Pollinated
are often yellow or blue and have a scent
Bird Pollinated
are often yellow, orange, or red and don’t have strong scent
Bat Pollinated
often have dusky white petals and are scented
Wind Pollinated
often have smaller petals or lack of petals and have no scent of nectar
Coevolution
is recirocal adaptation caused by 2 different species (flower and animal pollinators) forming interdependent relationship that affects the course of both evolution
Pollination
Pollination is the transfer of pollen from anther to stigma
Fertilization
is after pollination in which the 2 gametes fuse together
Double Fertilization
happens when in flower’s ovule egg fuses with 1 sperm forming a zygote (fertilized egg)
Zygote
eventually develops into a multicellular embryo in the seed
The 2 polar nuclei
fuse with the second sperm cell forming a triploid nutritive tissue called a endosperm
A Eudicot Embryo
develops in the seed in orderly fasion, from proembryo to globular embryo to heart stage to torpedo tage
A Seed Coat
surrounds the seed
Ovules
are structures with potential to develop into seeds
Ovaries
are structure with the potential to develop into fruits
Seeds
are enclosed within the fruits which are mature ripened ovaries
Simple Fruits
develop from a single ovary that consists of one carpel or several fused carpels
Aggregate fruits
develop from a single flower with many separate ovaries
Multiple fruits
develop from the ovaries of many flowers growing in close areas together on common axis bc of sun
Accessory fruits
is the major part of the fruit consists of tissue other than ovary tissue
Germination
is the process of seed sprouting because of internal factors affecting the descion to germinate or not
Factors
include maturity of embryo, prescence of lack there of of chemical inhibitors, prescnce of lack of of hard, thick seed coats
External Environmental
factors include required oxygen, water, temperature and light
Rhizomes, Tubers, Bulbs, Corms and Stolons
are stems specialized for asexual reproduction
Tuber
is the fleshy underground stem enlarged for food storage
Bulb
is a modified underground bud with fleshy storage leaves attached to a short stem
Corm
is a short erect underground stem covered by papery scales
Stolon
is a horizontal above ground stem with long internodes
Apomixes
is the production of seeds and fruits without sexual reproduction
Sexual Reproduction
involves the union of 2 gametes
Asexual Reproduction
involves formation of offspring without fusion of gametes
Tropisms
are directional growth responses
Phototropism
is growth response to the direction of light
Gravitropism
is growth response to the influence of gravity
Thigmotropism
is growth response to contact with solid object
Enzyme-linked receptors
are what plant hormones bind to
Auxin
involved with cell elongation; tropisms
Apical dominance
is the inhibition of axillary buds by the apical meristem and fruit development
Gibberellins
are involved in stem elongation, flowering, and germination
Cytokinins
promote cell division and differentiation
senescence
which is the natural aging process; it interacts with auxin and ethylene in apical dominance
Ethylene
plays role in ipening fruits; apical dominance; leaf abscission; wound response
Thigmomorphogensis
is a developmental response to mechanical stressors like wind and senescence
Abscisic Acid
is a environmental stress hormone involved in stomatal closure caused by water sress and in seed dormancy (temporary state of reduced physiological activity)
Brassinosteroids
are involved in several aspects of plant growth and development such as
Jasmonates
affect several plant processes such as
Salicylic Acid
triggers systematic acquired resistance that helps defend plants against pathogens and isect pests
systematic acquired resistance
that helps defend plants against pathogens and isect pests
Systemin
is polypeptide stimulates a natural defense mechanism in which the plant produces molecules that disrupt insect digestion
Oliogosaccharins
are short branched chains of sugar molecule which inhibit flowering and stimulates vegetative growth
Photoperiodism
is any response of plants to the duration and timing of light and dark
Short day plants
detect the lengthening nghts of late summer and flower at that time
Intermediate day plants
flower when exposed to days and nights of intermediate length
chrome
has 2 forms Pr and Pfr named for wavelength they absorb
Pfr
is the active form, triggering or inhibiting physiological responses like flowering, shade avoidance , and light requirement for germination
Signal Transduction
is the oathway that starts it, when phytochrome in cytoplasm absorbs red light and is converted to active form Pfr which goes into nucleus
Circadian rhythm
is a regular period in organisms growth that approximates a 24 hour day and is rest by rising and setting sun
Ex.
Opening and closing of stomata and sleep movements
CHAPTER 23- UNDERSTANDING DIVERSITY: SYSTEMATICS (pg 482)
OVERVIEW CLASSYFYING ORGANISMS MAJOR BRANCHES IN TREE OF LIFE RECONCSTRUCTING PHYLOGENY CONSTRUCTING PHYLOGENTIC TREES
CLASSYFYING ORGANISMS
Systematics is the scientific study of the diversity of organisms and their evolutionary relationships Term classification means arranging organisms into groups based on similarities that reflect evolutionary relationships among lineages Organisms are named using the binomial system Ea…
Systematics is the scientific study of the diversity of organisms and their evolutionary relationships
Taxonomy is the science of naming, describing, and classifying organisms
Organisms are named using the binomial system
The binomial system of nomenclature is classification in which each species is assigned a unique two part name
The binomial system of nomenclature is classification in which each species is assigned a unique two part name
First part of name is genus Second part of name is specific epithet
Each taxonomic level of organisms is more general than the level below it
As you move up hierarchy each group is more inclusive The range from species to domain is order A taxon is a formal grouping of organisms at any given level
The range from species to domain is order
Genus- closely related species Family -> orders -> classes -> phyla-> kingdoms-> domains
Biologists are beginning to move away from linnean categories because its to hard to make names
One group of biologists has proposed a clissification called PhyloCode
One group of biologists has proposed a clissification called PhyloCode
Based on evolutionary relationships, ranks are not used, a species is defined as a segment of a population lineage Organisms would be grouped in Clades . A clade is a group of organisms with a common ancestor
MAJOR BRANCHES IN TREE OF LIFE
In beginning biologists divided organisms into kingdoms Plantae and animalia A third kingdom protista was made for bacteria and other microorganisms Fungi was made a kingdom after because fungi are not photosynthetic so not a plant Kingdom prokaryotae made to accomadate bacteria which …
Kingdom prokaryotae made to accomadate bacteria which are different than all organisms
They divded prokayotae into kingdoms bacteria and archaea
Phylogen (“production of phyla”) is the evolutionary history of a group of organisms from a common ancestor
Population is individuals of same species in specific area
A homology refers to the prescence, in 2 or more species, of a structure derived from a recent ancestor
Wings between bird and bat
CONSTRUCTING PHYLOGENTIC TREES
In a Phenetic Approach relationships are based on number of shared characterists Cladistics or phylogentic systematics is approach where derived characteristics are analyzed and used to infer other relationships In a cladogram the branches depict evolutionary history of each group The …
In a cladogram the branches depict evolutionary history of each group
Each branch point is called a node is the split of more groups
Outgroup analysis is a method for estimating which attributes are shared in group of organisms
A Outgroup is a taxon that is considered to have diverged earlier than the ingroups
The principle of Parsimony is when biologists choose simplest explanation to interpret data
Maximum likelihood is also used especially in molecular data
CHAPTER 24- VIRUSES AND PROKARYOTES (pg 500)
OVERVIEW VIRUSES VIROIDS AND PRIONS PROKARYOTES TWO PROKARYOTE DOMAINS IMPACT OF PROKARYOTES
Viruses are obligate intracellular parasites which means they can only survive on host cells
A virus can contain either DNA or RNA
The Lytic Reproductive Cycle is cycle when virus destroys host cells
Viruses with only a lytic cycle are called virulent meaning they cause disease and often death There are 5 steps
There are 5 steps
Attachment or absorption- virus attaches to receptors on host cells, ensures infection of specific host Penetration- virus penetrates plasma membrane and moves to cytoplasm. Replication and Synthesis- viral genome contains info to produce new viruses. Virus degrades host’s nucleic acid …
Restriction Enzymes are enzymes that cut up foreign DNA of the phage
Protects its own DNA by slightly modifying it after replication
In a Lysogenic Cycle the viral genome becomes integrated in host bacteria DNA and is then called a provirus or prophage
When bacterial DNA replicates the provirus also replicates
A Retrovirus are RNA viruses that have a DNA polymerase called Reverse Transcriptase which is used to transcribe the RNA genome into a DNA intermediate
The virus RNA then becomes integrated into the real DNA and takes over HIV (human Immunodefiency Virus) is a retrovirus
VIROIDS AND PRIONS
A Viroid is a infective agent that is smaller than a virus and has no protein coat A Prion is a protein particle and infective agent called “proteinaceous infectious particle”
A Prion is a protein particle and infective agent called “proteinaceous infectious particle”
Prions are found in brain of patients with TSE or transmissible spongiform encephalopathies
Unlike viruses, viroids and prions prokaryotes are cellular organisms
Assigned to 2 domains Archaea and Bacteria
Prokaryotes have 2 basic shapes spherical (COCCI) and road shaped (BACILLI)
Cocci occur singly in some species and in groups of independent cells Bacilli occur as single rods or long chains Some for spirals or spirochete is flexible and spirillum is rigid A spirillum shaped like a comma is called a vibrio
Most have a cell wall surrounding plasma membrane, it provides support, shape, and no bursting
The bacterial cell wall includes peptidoglycan , a complex polymer of 2 types of sugar liked by polypeptides
Bacterial wall composition is found by staining the wall. Bacteria that absorb and retain the violet stain are called gram- positive . Walls that do not retain stain are called gram- negative
Postive walls are thick where as negative wall has 2 layers, (thin inside layer, thick outside membrane)
A prokaryotes move by rotating their flagella , number and location of flagella help classify bacteria
Many prokaryotes show chemotaxis , a movement in response to chemicals in the environment
Most prokaryotes reproduce with Binary Fission , a process in which one cell divides in 2 similar cells
Less common Asexual reproduction with bacteria is Budding . Cell develops a bulge or bud that eventually separate Only a few bacteria divide by fragmentation where walls develop within cell and then separates into new cells
The exhange of genes between bacteria is gene transfer and results in genetic recombination
Horizontal Gene Transfer occurs when organism transfers genetic material to another organism that is not offspring
Horizontal Gene Transfer occurs when organism transfers genetic material to another organism that is not offspring
From parent to offspring is Vertical Gene Transfer
Conjugation is where two cells of different mating types come together and genetic material is transferred
Donor cells- F+, recipient cells
Donor cells- F+, recipient cells
are cells in Ecoli
When environment becomes to harsh some bacteria will become dormant. Some bacteria form dormant extremely durable cells called endospores
Many types of bacteria that inhabit watery environments form dense films called biofilms that attach to solid surface
Some bacteria are autotrophs that use carbon dioxide as source of carbon for manufacture of organic molecules
Prokaryotes are classified as Chemotrophs (get energy from chemical compounds) and phototrophs (get energy from capturing light)
Most bacterial cells are aerobic and require oxygen for cellular respiration
Many are facultative anaerobes that use oxygen for cellular respiration if it is available but can carry on metabolism anaerobically when necessary Other bacteria are Obligate Anaerobes that carry out anaerobic respiration
TWO PROKARYOTE DOMAINS
There are 2 different groups of prokaryotes, each group has signture sequences which are regions of rRNA that have unique nucleotide sequences
There are 2 different groups of prokaryotes, each group has signture sequences which are regions of rRNA that have unique nucleotide sequences
Methanogens are methane producers that are large diverse group that inhabit oxygen free environments Extreme Halophiles are heterotrophs that live in saturated brine solutions like salt ponds Extreme Thermophiles require high temperature for growth nad inhabit acidic environments
IMPACT OF PROKARYOTES
Symbiosis is the relationship between two members of two or more species Microbiota is a population of microorganisms that are harmless symbiotic prokaryotes Koch’s Postulates is used to demonstrate that a specific pathogen causes a specific disease symptom Exotoxins are strong poisons…
Symbiosis is the relationship between two members of two or more species
Partners in a symbiotic relationsip are called symbionts Mutualism is a symbiotic relationship in which both partners benefit Commensalism where one partner benefits and the other is neither harmed nor helped Parasitism one partner lives on or in the other
Parasitism one partner lives on or in the other
The parasite benefits and the host is harmed
CHAPTER 25- PROTISTS (pg 530)
OVERVIEW INTRODUCTION TO PROTISTS EVOLUTION OF EUKARYOTES REPRESENTATIVE PROTISTS
INTRODUCTION TO PROTISTS
Most protists are unicellular with each cell forming a complete organism capable of performing all characteristics of life Some protists form colonies which are loosely connected groups of cells Some are multicellular composed of many cells Although most protists are free living some f…
Some protists form colonies which are loosely connected groups of cells
Some colonies are coenocytic consisting of a multinucleate mass of cytoplasm
Although most protists are free living some form symbiotic relationships with others
These associations range from mutualism a more or less equal partnership to commensalisms where one partner benefits and the other is unaffected
EVOLUTION OF EUKARYOTES
Ultrastructure is the fine details of cell structure revealed by electron microscopy Monophyletic taxa have a common ancestor
Zooflagellates are mostly heterotrophic, unicellelular organisms with spherical or elongated bodies
They move rapidly with whiplike flagella located at the front end
Most excavates are endosymbionts and live in anoxic (without oxygen) environments
One group of modern day excavates are diplomonads which retain some characteristics thought to have been present in ancient protists
Ciliates are one of the most complex eukaryotic cells
One group of these is hypotrichs , they have greatly modified cilia and move in darting motions Special organelles called contractile vacuoles control water regulation in freshwater ciliates Ciliates differ from other protists in having 2 kinds of nuclei.
Ciliates differ from other protists in having 2 kinds of nuclei.
1 or more small diploid micronuclei that function in reproduction one larger polyploidy macronucleus that controls cell metabolism and growth
Dinoflagellates are unicellular and have 2 flagella, they are photosynthetic and have chlorophyll carotenoids including fucoxanthin , a yellow cartenoid
Most DINO are endosymbionts, these symbiotic are called zooxanthellae and lack cellulose plates and flagella
Apicomplexans are a large group of parasitic, spore forming alveolates, some which cause diease in humans
At some point in life cycle they produce sporozoites , small infective agents transmitted to next host For this reason some call them sporozoa
Heterokonts include water molds, diatoms, golden algae, and brown algae
Water Molds were once classified as fungi, both have a body called a mycelium that grows over organic material. The mycelium is made up of hyphae , threadlike fibers After fusion of male and female nuclei, thick walled oospores develop from the oospheres (female gamates)
Golden algae are found in both fresh and marine environments
Reproduction is Asexual and involves the production of biflagellate, motile spores called zoospores Compose a significant portion of oceans nanoplankton , extremely minute algae
Brown Algae include the giants of the protists kingdom, they are largest most complex of all algae, called kelps
Many kelp have leaflike blades in which most photosynthesis occurs. Stemlike stipes and rootlike anchoring holdfasts also Reproduction is varied and complex in brown algae, use both Asexual zoospores and sexual gamates Most have life cycle that exhibits alternation of generations , in w…
Monophyletic group of plants include red algae and green algae
Red algae is multicellular, body is interwoven filaments Chloroplasts of red contain phycoerythrin a red pigment and phycocyannin a blue pigment
Green algae have pigments, energy reserve products, and cell walls
Reproduction involves gamate formation in unicellular gametangia , reproductive structure in which gamates are produced If the 2 falgellate gamates are identical in size and appearance, sexual reproduction is isogamous Some green are oogamous and produce a nonmotile egg and a flagellate…
If the 2 falgellate gamates are identical in size and appearance, sexual reproduction is isogamous
Anisogamous sexual reproduction involves the fusion of 2 gamates of different sizes
Foraminiferans are marine cercozoa that produce elaborate tests
Some are preserved in the fossil record and are used as fossil index markers to help identify others
Actinopods are marine plankton cercozoa with long cytoplasmic projections called axopods that protrude through pores in shell
Some called radiolarians secrete elaborate glassy shells made of silica
Cellular slime molds are amoebozoa close to amebas
Some cycle causes them to congegrate by the thousands and as a unit its called pseudoplasmodium
Fungi are eukaryotes, their cells contain membrane enclosed nuclei, mitochondria, and other membranous organelles
The cell wall consists of complex carbs including chitin , a polymer that consists of subunits of nitrogen sugar
DESCRIBE BODY PLAN OF FUNGUS
Mycologists are biologists who study fungi, identified 2 types based on body plan: yeats and molds
Mycologists are biologists who study fungi, identified 2 types based on body plan: yeats and molds
Simplest fungi are yeasts which are unicellular with a round shape Most fungi are molds, body is long filaments called hyphae
Most fungi are molds, body is long filaments called hyphae
First develops from a unicelleluar spore, as they grow form a mass known as a mycelium In most fungi the hyphae are divided by walls called septa into individaual cells containing one or more nuclei
DESCRIBE LIFE CYCLE OF TYPICAL FUNGUS, INCLUDING SEXUAL AND ASEXUAL
Fungi reproduces by means of microscopic spores , which are reproductive cells that can develop new organisms Sporangia are structures in which spores are produced In sexual reproduction a process called plasmogamy is where two genetically compatible hyphae come together
Fungi reproduces by means of microscopic spores , which are reproductive cells that can develop new organisms
Can reproduce sexually or Asexually
Sporangia are structures in which spores are produced
Spores are produces by mitosis and then released into air Conidiophores are specialized hyphae that produce asexual spores called conidia
In sexual reproduction a process called plasmogamy is where two genetically compatible hyphae come together
Resulting cell has 2 nuclei, the 2 haploid cells then fuse in process called karyogamy and results in zygote nucleus
FUNGAL DIVERSITY
Some chytids undergo an alternation of generations where it spends part of life in multicellular haploid and other in diploid
CHARACTERISTICS OF KINGDOM FUNGI
Fungi are eukaryotic heterotrophs that secrete digestive enzymes to digest food Fungi are characterized by cell walls made of chitin
BODY PLAN OF FUNGUS
Fungus may be unicellular yeast or a filamentous multicellelular mold Body of most multicellular consist of long threadlike filaments called hyphae that form tangled mass called mycelium Perforated septa , or cross walls, divide the hyphae into individual cells In fungi (zygomycetes an…
LIFE CYCLE OF TYPICAL FUNGUS (SEXUAL REPRODUCTION)
Most fungi reproduce by means of spores , which are produced on aerial hyphae, when spore lands on good spot it germinates When 2 different fungi mating types meet their hyphaes fuse in process called plasmogamy Karyogamy, fusion of nuclei, takes place in the hyphal tip and results in a…
When 2 different fungi mating types meet their hyphaes fuse in process called plasmogamy
Cytoplasm fuses but nuclei is still separate Fungi enters a dikaryotic (n + n) stage where new cells form with one of each nucleus
Karyogamy, fusion of nuclei, takes place in the hyphal tip and results in a diplod (2n) zygote nucleus
Meiosis takes place making 4 genetically different haploid nuclei
ARGUMENT THAT FUNGI ARE CLOSELY RELATED TO ANIMALS
Chytrids or chytridiomycetes produce flagellate cells at some stage in life cycle
Chytrids or chytridiomycetes produce flagellate cells at some stage in life cycle
No other fungli have flagella Thus chytrids are earliest fungi to evolve from protist
DESCRIBE LIFE CYCLE, AND GIVE EXAMPLES OF FUNGAL GROUPS
Chytrids reproduce both sexual ways, their gamates and zoospores are flagellate Zygomycetes , like black bread mold, form haploid thallus that produces both asexual spores and sexual spores
Chytrids reproduce both sexual ways, their gamates and zoospores are flagellate
A common chytrid spends part of life in multicellular haploid thallus and part as a multicellular diploid thallus The haploid produces 2 flagellate gametes that fuse Both plasmogamy and karyogamy occur producing flagellate zygote
Zygomycetes , like black bread mold, form haploid thallus that produces both asexual spores and sexual spores
Asexual germinate to make new thalli Sexual, 2 different haploid mating types (PAGE 578 READ)
EXPLAIN SIGNIFICANCE OF FUNGI AS DECOMPOSERS
They break down organic compounds in dead organisms, leaves, garbage, into nutrients that can be recycles
DESCRIBE IMPORTANT ECOLOGICAL ROLE OF MYCORRHIZAE
Mycorrhizae are myutal relationships between fungi and the roots of plants Fungus suppliues water and nutrients to plant and plant gives organic compounds needed to fungus
DESCRIBE UNIQUE NATURE OF LICHEN
Lichen is a symbiotic combnation of a fungus and a photoautotroph Photo provides fungus with organic compounds, shelter, water Lichen have 3 main growth stages; crustose, foliose, fruticose
SUMMARIZE THE WAYS FUNGI IMPACT HUMANS ECONOMICALLY
Mushrooms can be used as foods Yeasts are vital in production of beer and wine and bread Certain fungi produce cheeses and soy sauce Also used to make citric acid and other industrial chemicals
SAY IMPORTANCE OF FUNGI TO BIOLOGY AND MEDICINE. HOW DOES IT AFFECT PLANTS, HUMANS, AND WHAT DISEASES
Yeats are used as model organisms for research in molecular biology and genetics. Also used for control of insects Used to make medicines including penicillin and antibiotics Fungi are opportunistic pathogens in humans, can cause disease like athletes foot, ringworm, candidiasis, histop…
CHAPTER 27- THE PLANT KINGDOM (SEEDLESS PLANTS)
ADAPTATIONS OF PLANTS NAME GREEN ALGAE GROUP FROM WHICH PLANTS ARE SAID TO HAVE DESCENDED SUMMARIZE FEATURES THAT DISTINGUISH BRYOPHYTES FROM OTHER PLANTS DESCRIBE 3 PHYLA OF BRYOPHYTES DESCRIBE LIFE CYCLE OF MOSSES AND COMPARE TO GAMETOHYTE AND SPOROPHYTE GNERATIONS DESCRIBE FEATURE…
ADAPTATIONS OF PLANTS
An important difference between plants and algae is a waxy cuticle that covers aerial portion of plant Stomata are tiny pores which dot the surface of leaves Gametangia are the sex organs of most multicellelar fungus, algae are unicellellar Alternation of generations is the plant life …
Gametangia are the sex organs of most multicellelar fungus, algae are unicellellar
In plants the fertilized egg develops into a multicellular embryo (young plant) within female genetalia
Alternation of generations is the plant life cycle in which they psend part of life in haploid gamete generation and other half in diploid sporophyte generation
During fertilization zygote is what these fused gamete are called It then develops into a multicelleur embryo
NAME GREEN ALGAE GROUP FROM WHICH PLANTS ARE SAID TO HAVE DESCENDED
Plants probably arose from green algae called charophytes This is based in part on molecular comparisons of DNA and RNA
SUMMARIZE FEATURES THAT DISTINGUISH BRYOPHYTES FROM OTHER PLANTS
Unlike land plants, bryophytes are nonvascular and lack xylem and phloem
Unlike land plants, bryophytes are nonvascular and lack xylem and phloem
They are only plants with dominant gametophyte generation
DESCRIBE 3 PHYLA OF BRYOPHYTES
Mosses (bryophyta) have gametophytes that are green plants that grow from a filamentous protonema Liverworts (hepatophyta) have gametophytes that are flattened lobelike thalli others are leafy Hornworts (anthocerophyta) have thalloid gametophytes
DESCRIBE LIFE CYCLE OF MOSSES AND COMPARE TO GAMETOHYTE AND SPOROPHYTE GNERATIONS
Green moss gametophyte bears archegonia at top of plants During fertilization sperm fuses with egg Zygote grows into embryo that develops into moss sporophyte Meiosis occurs within capsule of sporophyte to make spores Spore germinates, grows into protonema that forms buds that develop…
DESCRIBE FEATURES THAT IS DIFFERENT BETWEEN SEEDLESS VASCULAR PLANTS AND ALGAE AND BRYOPHYTES
Seedless have several adaptations that algae and bryophytes lack including vascular tissues and domnant sporophyte generation Reproduction in seedless depends on water as a transport medium for motile sperm cells
DESCRIBE 2 PHYLA OF SEEDLESS PLANTS
Sporophytes of club mosses consist of roots, rhizomes, erect branches, and leaves that are microphylls Ferns are most diverse group, consist of rhizome that bears fronds and true roots Whisk ferns have dichotomously branching rhizomes and erect stems, lack true roots Horsetails have ro…
Ferns are most diverse group, consist of rhizome that bears fronds and true roots
Also include whisk ferns and horsetails
DECRIBE LIFE CYCLE OF FERNS, COMPARE SPORO AND GAMETOPHYTE GENERATIONS
Fern have roots, rhizomes, leaves are megaphylls. Leaves bear clusters of sori Meiosis in spoangia produces haploid Fern gametophyte called prothallus develops from a haploid spore
COMPARE GENERALIZED LIFE CYCLES OF HOMOSPOROUS AND HETEROSPOROUS PLANTS
Homospory is the production of one kind of spore, is most common bryophyte Heterospory is the production of 2 kinds of spores (micro and mega spores) and occurs in certain club mosses
Homospory is the production of one kind of spore, is most common bryophyte
spore gives rise to gametophyte plants which produce both egg and sperm cells
Heterospory is the production of 2 kinds of spores (micro and mega spores) and occurs in certain club mosses
Microspores give rise to male gametophyte which make sperm Megaspore give rise to female to make egg
CHAPTER 28- PLANT KINGDOM (SEED PLANTS)
OVERVIEW INTRODUCTION TO SEED PLANTS TRACE LIFE CYCLE OF A PINE AND COMPARE ITS SPORO AND GAMETOPHYTE GENERATIONS SUMMARIZE FEATURES THAT DISTINGUISH GYMNOSPERM FROM BRYOPHYTES AND FERNS NAME AND DESCRIBE 4 PHYLA OF GYMNOSPERMS SUMMARIZE FEATURES THAT DISTINGUISH FLOWERING PLANTS FRO…
3 reasons why seeds are better than spores
Seed contains multicell young plant with embryonic root, stem, and leaves already formed where as spore in single cell Seed contains a abundant food supply Seed is protected by seed coat that is thick and hard
INTRODUCTION TO SEED PLANTS
After fertilization an ovule develops in to a seed Seed plants have integuments which are layers of sporophyte tissue that surround ovule There are 2 groups of seed plants; gymnosperms and angiosperms Both plants have vascular tissues xylem for conducting water and minerals and phloem …
There are 2 groups of seed plants; gymnosperms and angiosperms
Gymnosperms produce seeds that are exposed on scales of cones- no wall protection Angiosperm are flowering plants that produce seed within a fruit
TRACE LIFE CYCLE OF A PINE AND COMPARE ITS SPORO AND GAMETOPHYTE GENERATIONS
A pine tree is a mature sporophyte, heterosporous, and produce both kinds of seeds After pollination the transfer of pollen to female cones, pollen tube grows through the megasporangium to the egg After fertilization the zygote develops into embryo encased inside a seed
A pine tree is a mature sporophyte, heterosporous, and produce both kinds of seeds
Male cones produce microspores that develop into pollen grains to be carried by winds Female produce megaspore , 1 for each 4 megaspore produced
SUMMARIZE FEATURES THAT DISTINGUISH GYMNOSPERM FROM BRYOPHYTES AND FERNS
Unlike bryo, gymnosperm are vascular plants that produce seeds. They also produce wind borne pollen grains
NAME AND DESCRIBE 4 PHYLA OF GYMNOSPERMS
Conifers- is largest phylum and are wooden plants that bear needles and produce seeds in cones Cycads- are palm and fern like in appearance Ginkgo bilboa- is a deciduous tree, in which its female ginkgo produces flashy seeds directly from branches Gnetophytes- share number of traits wi…
Conifers- is largest phylum and are wooden plants that bear needles and produce seeds in cones
Most are monoecious which have male and female reproductive parts in separate cones in same plant
Cycads- are palm and fern like in appearance
They are dioecious where they have male and female reproductive on separate plants but reproduce with pollen and seeds in cones
SUMMARIZE FEATURES THAT DISTINGUISH FLOWERING PLANTS FROM OTHER PLANTS
Flowering plants or angiosperms, make phylum of vascular plants that produce flowers and seeds enclosed in a fruit (most successful group)
Flowering plants or angiosperms, make phylum of vascular plants that produce flowers and seeds enclosed in a fruit (most successful group)
The flower Unlike gymnosperm, ovules of flowering plants are enclosed in ovary (after fertilization ovules becomes seeds, and ovary into fruit
The flower
contains sepals, petals, stamens, carpels , functions in reproduction
EXPLAIN LIFE CYCLE OF FLOWERING PLANT AND EXPLAIN DOUBLE FERTILIZATION
Sporophyte generation is dominant in flowering plants Each microspore creates pollen grain, 1 of each 4 megaspores made by meiosis develops into embryo sac Double fertilization
Each microspore creates pollen grain, 1 of each 4 megaspores made by meiosis develops into embryo sac
Sac contains 7 cells with 2 polar nuclei
Double fertilization
results in the formation of a diploid zygote and triploid endosperm and is characteristic of flowering plants
CONTRAST EUDICOTS AND MONOCOTS (TWO BIGGEST FLOWERING PLANTS)
Monocots have floral parts in threes and their seeds each contain 1 cotyledon , the nutritive tissue in their mature seeds is endosperm Eudicots usually have floral parts in 4 or 5’s and seeds contain 2 cotyledons
Eudicots usually have floral parts in 4 or 5’s and seeds contain 2 cotyledons
Nutritive organs in their mature seeds
DISCUSS EVOLUTIONARY ADAPTATIONS OF FLOWERING PLANTS
Flowering plants reproduce sexually by making flowers, after double fertilization seeds form within fruits They have efficient water conducting vessel elements in their xylem and efficient carb conducting sieve tube elements in phloem
SUMMARIZE EVOLUTION OF GYMNOSPERM FROM SEEDLESS VASCULAR PLANTS, AND TRACE EVOLUTION OF FLOWERING PLANTS FROM GYMNSPERM
Seed plants wrose from seedless plants, progymnosperm were seedless vascular plants that had woody tissue Evolution is unclear Flowering probably descended from ancient gymnosperms
Seed plants wrose from seedless plants, progymnosperm were seedless vascular plants that had woody tissue
These gave rise to seed ferns
CHAPTER 32- PLANT STRUCTRE, GROWTH, AND DIFFERENTIATION
OVERVIEW CONTRAST 2 DIFFERENT LIFE HISTORY STRATEGIES FOR PLANTS DISCUSS FUNCTIONS OF VARIOUS PARTS OF PLANTS, INCLUDING SHOOT AND ROOT SYSTEMS DESCRIBE STRUCTURE AND FUNCTION OF GROUND TISSUE SYSTEM DESCRIBE STRUCTURE AND FUNCTIONS OF VASCULAR TISSUE SYSTEM (XYLEM AND PHLOEM) DESCRI…
Many woody perennials are deciduous where they shed their leaves before winter to produce new stems and new leaves later
Ex. Evergreen are other type that keep needles
CONTRAST 2 DIFFERENT LIFE HISTORY STRATEGIES FOR PLANTS
Plants have variety of strategies; long lived trees survive in rainforest where small plants cant live there
DISCUSS FUNCTIONS OF VARIOUS PARTS OF PLANTS, INCLUDING SHOOT AND ROOT SYSTEMS
Vascular plants are comprised of root and shoot system Although separate organs (root, shoot, leave, bud) exist in plants, tissue system are integrated through plant body
Vascular plants are comprised of root and shoot system
Root system is underground and gets water and minerals for plant, also keep plant in place Shoot system is aerial and gets sunlight and exchanged gases like co2 and oxygen Buds are underdeveloped embryonic shoots and develop on stems
Shoot system is aerial and gets sunlight and exchanged gases like co2 and oxygen
Consists of vertical stem that bears leaves and reproductive structures
Although separate organs (root, shoot, leave, bud) exist in plants, tissue system are integrated through plant body
Composed of 3 tissue systems; ground, vascular, and dermal
DESCRIBE STRUCTURE AND FUNCTION OF GROUND TISSUE SYSTEM
Ground tissue system consists of 3 tissues
Ground tissue system consists of 3 tissues
Parenchyma tissue is composed of living parenchyma cells that have primary cell walls Collenchyma tissue consists of collenchyma cells with unevenly thickened primary cell walls, tissue provides structural support Sclerenchyma tissue is composed of cells sclereids or fibers that both ha…
Parenchyma tissue is composed of living parenchyma cells that have primary cell walls
Functions are photosynthesis, storage and secretion
DESCRIBE STRUCTURE AND FUNCTIONS OF VASCULAR TISSUE SYSTEM (XYLEM AND PHLOEM)
Vascular tissue system conducts materials throughout plant body and provides support Xylem is complex tissue that conducts water and minerals Phloem is complex tissue that conducts sugar in solution
Xylem is complex tissue that conducts water and minerals
Cells that actually conduct are tracheids and vessel elements
Phloem is complex tissue that conducts sugar in solution
Sieve tube elements are conducting cells of phloem They are assisted by companion cells
DESCRIBE STRUCTURE AND FUCNTIONS OF DERMAL TISSUE SYSTEM
Dermal tissue system is outer protective covering of plant body Epidermis is a complex tissue that covers plant body Periderm is complex tissue that covers woody parts of plant
Epidermis is a complex tissue that covers plant body
That covers aerial parts secrete waxy cuticle to reduce water loss Stomata permits gas exhange between interior of shoot system and surrounding atmosphere Trichomes are outgrowths or hairs that occure in many sizes and have variety of functions
WHAT IS MEANT BY GROWTH IN PLANTS, HOW DOES IT DIFFER THAN GROWTH IN ANIMALS
Growth in plants is localized in specific regions called meristems Growth is 3 processes: cell division, cell elongation, cell differentiation
DIFFER BETWEEN PRIMARY AND SECONDARY GROWTH
Primary is increased in stem or root growth Secondary is increase in stem or root girth only occurs in long cylinders of meristematic cells through length of older stems or roots
DISTINGUISH BETWEEN APICAL MERISTEMS ND LATERAL MERISTEMS
Primary growth results from activity of apical meristems that are localized at tips of roots and shoots and within buds of stems The two lateral meristems responsible for secondary growth are the vascular cambium and the cork cambium
DISCUSS VARIATION IN LEAF FORM, INCLUDING SIMPLE VS COMPOUND, ARRANGEMENT ON STEM, AND VENATION PATTERNS
Usually consist of a broad, flat blade and stalklike petiole Leaves that are simple have only one blade where as compound has blade divided into 2 or more leaflets Arrangement on stem may be alternate (one leaf at each node) , opposite (two leaves each node) or whorled (three or more) …
Usually consist of a broad, flat blade and stalklike petiole
Some leaves have small outgrowths from base called stipules
Leaves may have parrelel or netted venation
Netted may be palmately netted with several major veins radiating from one point Or may be pinnately netted with veins branching along entire length of the midvein
DESCRIBE MAJOR TISSUES OF THE LEAF AND LABEL THEM
Upper and lower surfaces of leaf blade are covered by epidermis . A wacy cuticle covers the epidermis to help plant survive dry condition Stomata are small pores in epidermis that permit gass exchange during photosynthesis Mesophyll consists of photosynthetic parenchyma cells. Mesophyll…
Stomata are small pores in epidermis that permit gass exchange during photosynthesis
Each pore is surrounded by two guard cells that are associated with epidermal cells called subsidiary cells Subsidiary provide a reservoir of water and ions that move in and out of guard cells as they change shape
COMPARE LEAF ANATOMY IN EUDICOTS AND MONOCOTS
Monocot leaves have parallel venation where eudicot have netted venation Some monocots (corn) do not have mesophyll differentiated into distinct palisade and spongy layers Some monocots (grasses, reed, sedges) have guard shaped like dumbbells
RELATE LEAF STRUCTURE TO INTS FUNCTION IN PHOTOSYNTHESIS
Leaf structure is adapted primarily for photosynthesis (broad blades to get sunlight) Stomata open during the day for gas exchange and close at night to conserve water The transparent epidermis allows light to penetrate into the middle of leaf Air spaces in mesophyll tissue permits the…
EXPLAIN ROLE OF BLUE LIGHT IN OPENING OF STOMATA
Blue light which is a component of sunlight, triggers activation of proton pumps located in guard cell of plasma membrane
Blue light which is a component of sunlight, triggers activation of proton pumps located in guard cell of plasma membrane
Also triggers the synthesis of malic acid and hydrolysis of starch
OUTLINE THE PHYSIOLOGICAL CHANGES THAT ACCOMPANY STOMATAL OPENING AND CLOSING
Protons (H+) are pumped out of guard cells, As proton leave cells an electrochemical gradient (charge and concentration difference) forms on two sides of guard cell plasma membrance The gradient drives the uptake of potassium ions through voltage activated potassium channels into guard …
Protons (H+) are pumped out of guard cells,
Occurs when malic acid ionizes
Stomata close when water leaves guard cells as result of decline of gradient
Sucrose converts to starch which is osmotically inactive
DISCUSS TRANSPIRATION AND ITS EFFECTS ON PLANTS
Transpiration is the loss of water vapor from aerial parts of plants, occurs primarily in stomata Rate of transpiration is affected by environmental factors like temperature, wind, humidity Tranpiration appears to be both good and bad to plant, represents tradeoff off co2 requirment for…
DISTINGUISH BETWEEN TRANSPIRATION AND GUTTATION
Guttation is the release of liquid water from leaves
Guttation is the release of liquid water from leaves
Occurs through special structures when transpiration is negligible and available soil moisture is high
DEFINE LEAF ABSCISSION, EXPLAIN WHY IT OCCURS, AND WHAT PHYSIOLOGICAL AND ANATOMICAL CHANGES PROCEED IT
Leaf abscission is loss of leaves that occurs as winter approaches or at beginning of dry period It is a complex process involving physiological and anatomical changes Abscission zone develops where the petiole detaches from the stem
Abscission zone develops where the petiole detaches from the stem
Sugar, amino acid, are transported from leaves to other plant parts Chlorophyll breaks down and carotenoids and anthocyanins become evident
LIST 4 EXAMPLE OF MODIFIED LEAVES AND GIVE FUNCTIONS OF EACH
Spines are leaves adapted to deter herbivores Tendrils are modified for grasping and holding other structures (support weak stems) Bud scales are modified to protect delicate meristematic tissue or dormant buds Bulbs are short underground stems with fleshy leaves specialized for storag…
CHAPTER 34- STEMS AND TRANSPORT IN VASCULAR PLANTS
DESCRIBE THE EXTERNAL FEATURES OF A WOODY TWIG NAME TWO LATERAL MERISTEMS AND DESCRIBE THE TISSUES THAT ARISE FROM EACH OUTLINE THE TRANSITION FROM PRIMARY GROWTH TO SECONDARY GROWTH IN WOODY STEM DESCRIBE THE PATHWAY OF WATER MOVEMENT IN PLANTS DECRIBE WATER POTENTIAL EXPLAIN ROLES …
DESCRIBE THE EXTERNAL FEATURES OF A WOODY TWIG
Woody twigs show the external structure of stems Node is the area on stem where leaf is attached Area between 2 successive nodes is a internode Leaf scar shows where each leaf was attached to stem Bundle scars are areas within leaf scar where vascular tissue extended from stem to leaf…
Woody twigs show the external structure of stems
Buds are underdeveloped embryonic shoots Terminal buds are located at tip of stem where as axillary buds (lateral buds) are located in leaf axils A dormant bud is covered and protected by bud scales
A dormant bud is covered and protected by bud scales
When bud resumes its growth, bud scales covering bud fall off leaving bud scale scars
NAME TWO LATERAL MERISTEMS AND DESCRIBE THE TISSUES THAT ARISE FROM EACH
Vascular cambium is lateral meristem that produces secondary xylem (wood) and secondary phloem (inner bark) Cork cambium produces periderm whch consists of cork cells which are replacements for epidermis in woody cells
OUTLINE THE TRANSITION FROM PRIMARY GROWTH TO SECONDARY GROWTH IN WOODY STEM
Secondary growth (production of secondary tissues, wood, and bark) occurs in some flowering plants and all cone bearing gymnosperms
Secondary growth (production of secondary tissues, wood, and bark) occurs in some flowering plants and all cone bearing gymnosperms
During it the vascular cambium divides in 2 directions to form secondary xylem (inside) and secondary phloem (outside)
DESCRIBE THE PATHWAY OF WATER MOVEMENT IN PLANTS
Water and minerals move from soil into root tissues Once in root zylem, they move upward from root xylem to stem xylem to leaf xylem
Once in root zylem, they move upward from root xylem to stem xylem to leaf xylem
Most of water entering the leaf exits leaf veins and passes into atmosphere
DECRIBE WATER POTENTIAL
Water potential is a measure of free energy of water Water moves from area of higher (less negative) to lower (more negative) water potential
Water potential is a measure of free energy of water
Pure water has potential of 0 megapascals where as water with dissolved solutes has a negative potential
EXPLAIN ROLES OF TENSION—COHESION AND ROOT PRESSURE AS MECHANISMS RESPONSIBLE FOR THE RISE OF WATER ANF DISSOLVED MINERALS IN XYLEM
Tension cohesion model explains that the evaporative pull of transpiration causes tension at top of plant As a result of the cohesive and adhesive properties of water, the column is pulled right up through plant Root pressue , caused by movement of water into roots from soil as result o…
Tension cohesion model explains that the evaporative pull of transpiration causes tension at top of plant
This tension is result of water potential gradient from slight negative in soil to very negative in atmosphere
Root pressue , caused by movement of water into roots from soil as result of active absorption of mineral ions from the soil explains rise of water in smaller plants (particulary with wet soil)
Root pressure pushes water up through xylem
DESCRIBE PATHWAY OF SUGAR TRANSLOCATION IN PLANTS
Dissolved sugar is translocated upward or downward in phloem from a source (with excess sugar like a leaf) to a sink (area of storage like roots)
Dissolved sugar is translocated upward or downward in phloem from a source (with excess sugar like a leaf) to a sink (area of storage like roots)
Sucrose is primary sugar translocated
DISCUSS THE PRESSURE FLOW HYPOTHESIS OF SUGAR TRANSLOATION IN PHLOEM
Movement in phloem explained by pressure flow hypothesis Companion cells load sugar into sieve tubes at the source (ATP required) The proton gradient drives the uptake of sugar by the cotransport of protons back into sieve tube elements Companion cells (requiring ATP) and passively (no…
Companion cells load sugar into sieve tubes at the source (ATP required)
ATP supplies energy to pump protons out of sieve tube elements
The proton gradient drives the uptake of sugar by the cotransport of protons back into sieve tube elements
Sugar accumulates in the sieve tube element causing the movement of water into the sieve tubes by osmosis
Companion cells (requiring ATP) and passively (no ATP) unload sugar from sieve tubes at the sink
Result, water leaves the sieve tubes by osmosis decreasing the turgor pressure (hydostatic pressure) inside tubes
DISTINGUISH BETWEEN TAPROOT AND FIBROUS ROOT SYSTEMS
Taproot system has one main root from which roots extend from Fibrous root has several adventitious roots of the same size developing from the end of the stem
LABEL CROSS SECTIONS OF A PRIMARY EUDICOT ROOT AND A MONOCOT ROOT, DESCRIBE THE FUNCTIONS OF EACH TISSUE
Primary roots have a epidermis, ground tissues, and vascular tissues Epidermis protects the root, root hairs , are short lived extensions of epidermal cells, aid in absorption of water and minerals Cortex consists of cells that store starch. Endodermis is innermost layer of cortex which…
Primary roots have a epidermis, ground tissues, and vascular tissues
Each tip is covered by a root cap a protective layter that covers the delicate root apical meristem and orients root so it grows downward
Pericycle, xylem, and phloem collectively make up the roots stele or vascular cylindar
Pericycle gives rise to lateral roots and lateral meristems Xylem conducts water and minerals Phloem conduscts sugar
Center of monocot oot consists of pith surrounded by a ring of alternating bundles of xylem or phloem
Monocot roots lack vascular cambium and don’t have secondary growth
TRACE PATHWAY OF WATER AND MINERAL IONS FROM SOIL THROUGH VERIOUS ROOT TISSUES AND DISTINGUISH BETWEEN THE SYMPLAST AND APOPLAST
As water move through soil into root they pass through root hair/epidermis -> cortex -> endodermis -> pericycle -> root xylem Water and minerals move through 2 pathways, apoplast (along interconnected porous cell walls) or symplast Ifrom one cells cytoplasm to the next through plasmomesm…
DISCUSS THE STRUCTURE OF ROOTS WITH SECONDARY GROWTH
Roots of gymnosperms and woody eudicots develop secondary tissues (wood and bark)
Roots of gymnosperms and woody eudicots develop secondary tissues (wood and bark)
Cork cambium produces periderm (outer bark)
DESCRIBE 3 ROOTS THAT ARE MODIFIED TO ERFORM UNCOMMON FUNCTIONS
Prop roots develop from branches or a vertical stem to grow downward into soil to help support certain plants Pneumatophores are aerial “breathing” roots that may assist in getting oxygen to submerged roots Some epiphytes have roots modified for photo synthesis
Prop roots develop from branches or a vertical stem to grow downward into soil to help support certain plants
Buttress roots are swollen bases or braces that support certain tropical rainforest trees that have shallow root system
LIST AND DESCRIBE 2 MUTUALISTIC RELATIONSHIPS BETWEEN ROOTS AND OTHER ORGANISMS
Mycorrhizae are mutually beneficial associations between roots and soil fungi Root nodules are swellings that develop on roots of leguminous plants and house millions of rhixobia (nitrogen bacteria)
DESCRIBE ROLES OF WEATHERING, ORGANISMS, CLIATE, AND TOPOGRAPHY IN SOIL FORMATION
Factors include parent material, climate, organisms, passage of time, and topography
Factors include parent material, climate, organisms, passage of time, and topography
Most soils are from parent material that is broken into smaller particles by weathering processes Soil organisms like plants, algae, fungi, worms, insect are important not only for formation but also cycling minerals Topography is a regions surface features, affects soil formation. Stee…
LIST THE FOUR COMPONENTS OF SOIL, AND GIVE THE ECOLOGICAL SIGNIFICANCE OF EACH
Soils is inorganic minerals, organic matter, air, water. Inorganic minerals provide anchorage and minerals for plants
Soils is inorganic minerals, organic matter, air, water. Inorganic minerals provide anchorage and minerals for plants
Organic matter increases soils water holding capacity and as it decomposes releases essential minerals into the soil Soil air provides oxygen for soil organisms to use during aerobic respiration Soil water provides water and minerals for plants and other organisms
DESCRIBE HOW ROOTS ABSORB POSITIVLY CHARGED MINERAL IONS BY THE PROCESS OF CATION EXCHANGE
CATIONS , positively charged mineral ions, are attracted and reversibly bound to clay particle which have a predominatly negative charges on outer surfaces In cation exchange roots secrete protons which are exchanged for other positively charged minerals ions freeing them into the soil w…
DISTINGUISH BETWEEN MACRONUTRIENTS AND MICRONUTRIENTS
Plants require 19 essential elements for growth Ten of the elements are macronutrients : carbon, hydrogen, oxygen, nitrogen, potassium, calcium, magnesium, phosphorous, sulfar, and silicon Micronutrients are 9 of the elements: sodium, zinc, chlorine, iron, boran, magganese, copper, nick…
Ten of the elements are macronutrients : carbon, hydrogen, oxygen, nitrogen, potassium, calcium, magnesium, phosphorous, sulfar, and silicon
Macro are required in fairly large amounts
Micronutrients are 9 of the elements: sodium, zinc, chlorine, iron, boran, magganese, copper, nickel, and molybdenum
Micro is needed in trace amount
EXPLAIN THE IMPACTS OF MINERAL DEPLETION AND SOIL EROSION ON PLANT GROWTH
Mineral depletion may occur in some soils that have been farmed because it disrupts the natural pattern of nutrient cycling from corn and are yanked early Soil erosion is the removal of soil by acts of agents such as water and wind
Soil erosion is the removal of soil by acts of agents such as water and wind
Causes loss of fertile soil because minerals and organic matter are removed as well
OVERVIEW
Flowering plants are known as angiosperm which include over 300,000 species and most successful group of plants Sexual reproduction in plants includes meiosis and fusion of reproductive cells
Sexual reproduction in plants includes meiosis and fusion of reproductive cells
Egg and sperm which are collectively called gametes Fusion of gametes is called fertilization
DESCRIBE THE FUNCTIONS OF EACH PART OF A FLOWER
Sepals cover and protect the flower parts when it is in bud Petals play role in attracting animal pollinators to flower Stamens produce pollen grains Carpel is the female reproductive unit A Pistil is made of a single carpel or group of fused carpels
Stamens produce pollen grains
Each stamen is made of thin stalk (filament) attached to saclike object ( anther)
A Pistil is made of a single carpel or group of fused carpels
Each pistil has 3 sections
Each pistil has 3 sections
Stigma where pollen and grain land Style through which the pollem tubes grow Ovary which contains one or more vacuoles
IDENTIFY WHERE EGGS AND POLLEN GRAINS ARE FORMED WITHIN THE FLOWER
Pollen forms in pollen sacs in the anther An egg and 2 polar nuclei , along with other nonpolar nuclei are formed into a ovule
Pollen forms in pollen sacs in the anther
Each pollen contains 2 cells One generates two sperm cells and the other makes a pollen tube Through the pollen tube the sperm cells get to the egg
An egg and 2 polar nuclei , along with other nonpolar nuclei are formed into a ovule
Both egg and polar nuclei participate in fertilization
COMPARE THE EVOLUTIONARY ADAPTATIONS THAT CHARACTERIZE FLOWERS POLLINATED IN DIFFERENT WAYS (INSECT, BIRD, BAT)
Insect Pollinated are often yellow or blue and have a scent Bird Pollinated are often yellow, orange, or red and don’t have strong scent Bat Pollinated often have dusky white petals and are scented Wind Pollinated often have smaller petals or lack of petals and have no scent of nectar
Wind Pollinated often have smaller petals or lack of petals and have no scent of nectar
Wind pollinated make a lot of pollen
DEFINE COEVOLUTION, AND GIVE EXAMPLES OF WAYS PLANTS AND THEIR ANIMAL POLLUTERS HAVE AFFECTED ONE ANOTHERS EVOLUTION
Coevolution is recirocal adaptation caused by 2 different species (flower and animal pollinators) forming interdependent relationship that affects the course of both evolution
Coevolution is recirocal adaptation caused by 2 different species (flower and animal pollinators) forming interdependent relationship that affects the course of both evolution
Ex. Flowers with large, showy petals and scent have evolved in some plants whereas hairy bodies that catch and hold sticky pollen evolved on bees
DISTINGUISH BETWEEN POLLINATION AND FERTILIZATION
Pollination is the transfer of pollen from anther to stigma Fertilization is after pollination in which the 2 gametes fuse together Double Fertilization happens when in flower’s ovule egg fuses with 1 sperm forming a zygote (fertilized egg)
Double Fertilization happens when in flower’s ovule egg fuses with 1 sperm forming a zygote (fertilized egg)
Zygote eventually develops into a multicellular embryo in the seed The 2 polar nuclei fuse with the second sperm cell forming a triploid nutritive tissue called a endosperm
TRACE THE STAGES OF EMBRYO DEVELOPMENT IN FLOWERING PLANTS AND LIST AND DEFINE THE MAIN PARTS OF SEEDS
A Eudicot Embryo develops in the seed in orderly fasion, from proembryo to globular embryo to heart stage to torpedo tage A mature seed contains both young plant embryo and nutritive tissue A Seed Coat surrounds the seed
A mature seed contains both young plant embryo and nutritive tissue
It is stored in the endosperm or in the cotyledons (seed leaves) used during germination
EXPLAIN THE RELATIONSHIPS AMONG THE FOLLOWINGL OVULES, OVARIES, SEEDS, AND FRUITS
Ovules are structures with potential to develop into seeds Ovaries are structure with the potential to develop into fruits Seeds are enclosed within the fruits which are mature ripened ovaries
DINSTINGUISH AMONG SIMPLE, AGGREGATE, MULTIPLE, AND ACCESSORY FRUITS
Simple Fruits develop from a single ovary that consists of one carpel or several fused carpels Aggregate fruits develop from a single flower with many separate ovaries Multiple fruits develop from the ovaries of many flowers growing in close areas together on common axis bc of sun Acce…
SUMMARIZE THE INFLUENCE OF INTERNAL AND ENVIRONMENTAL FACTORS ON THE GERMINATION OF SEEDS
Germination is the process of seed sprouting because of internal factors affecting the descion to germinate or not External Environmental factors include required oxygen, water, temperature and light
Germination is the process of seed sprouting because of internal factors affecting the descion to germinate or not
Factors include maturity of embryo, prescence of lack there of of chemical inhibitors, prescnce of lack of of hard, thick seed coats
External Environmental factors include required oxygen, water, temperature and light
Ex. Before germinating, dry seeds absorb water by imbibition
EXPLAIN HOW THE FOLLOWING STRUCTURES MAY BE USED TO PROPAGATE PLANTS ASEXUALLY: RHIZOMES, TUBERS, BULBS, CORMS, STOLONS, PLANTLETS, AND SUCKERS
Rhizomes, Tubers, Bulbs, Corms and Stolons are stems specialized for asexual reproduction Some leaves have meristematic tissue along margins which detach attachable plantlets Roots may develop adventitious buds that develop into suckers
Rhizomes, Tubers, Bulbs, Corms and Stolons are stems specialized for asexual reproduction
Tuber is the fleshy underground stem enlarged for food storage Bulb is a modified underground bud with fleshy storage leaves attached to a short stem Corm is a short erect underground stem covered by papery scales Stolon is a horizontal above ground stem with long internodes
Roots may develop adventitious buds that develop into suckers
Produce additional roots and may give rise to new plants
DEFINE APOMIXIS
Apomixes is the production of seeds and fruits without sexual reproduction
STATE THE DIFFERENCES BETWEEN SEXUAL REPRODUCTION AND ASEXUAL REPRODUCTION, AND DISCUSSES THE EVOLUTIONARY ADVANTAGES AND DISADVANTAGES OF EACH
Sexual Reproduction involves the union of 2 gametes Asexual Reproduction involves formation of offspring without fusion of gametes
Sexual Reproduction involves the union of 2 gametes
The offspring a genetically variable Parental genotypes aren’t saved leading to genetic diversity among offspring Is costly because both sexes gametes must be produced and then meet
Parental genotypes aren’t saved leading to genetic diversity among offspring
Lets individual change to its environment (survival)
Asexual Reproduction involves formation of offspring without fusion of gametes
Offspring are virtually identical to single parent Identical genes may be good in a stable envirnment with no change
Identical genes may be good in a stable envirnment with no change
Some plants that do reproduce asexually also do it sexually to have some genetic variablitity
CHAPTER 37- PLANT GROWTH AND DEVELOPMENT
DESCRIBE PHOTOTROPISM, GRAVITROPISM, AND THIGMOTROPISM DESCRIBE A GENERAL MECHANISM OF ACTION FOR PLANT HORMONES, USING AUXIN AS YOUR EXAMPLE DESCRIBE EARLY AUXIN EXPERIMENTS INVOLVING PHOTOTROPISM LIST SEVERAL WAYS EACH OF THESE HORMONES AFFECTS PLANT GROWTH AND DEVELOPMENT: AUXIN, GI…
DESCRIBE PHOTOTROPISM, GRAVITROPISM, AND THIGMOTROPISM
Tropisms are directional growth responses
Tropisms are directional growth responses
Phototropism is growth response to the direction of light Gravitropism is growth response to the influence of gravity Thigmotropism is growth response to contact with solid object
DESCRIBE A GENERAL MECHANISM OF ACTION FOR PLANT HORMONES, USING AUXIN AS YOUR EXAMPLE
Plants produce and respond to hormones , organic compounds that act as specific chemical signals for a veriety of responses that control growth and development Enzyme-linked receptors are what plant hormones bind to
Enzyme-linked receptors are what plant hormones bind to
Located in plasma membrane, hormone binds to receptor triggering a enzyme reaction
DESCRIBE EARLY AUXIN EXPERIMENTS INVOLVING PHOTOTROPISM
In 1870 Charles Darwin and his son did phototropism experiments on grass seedlings With coleoptile covered plant didn’t bend, with coleptile removed no bed, with it covered it bent 1920 Frits Went isolated the phototropic hormone from oat caleoptiles by removing their tip and placing on…
With coleoptile covered plant didn’t bend, with coleptile removed no bed, with it covered it bent
Darwin believed that some substance is transmitted from upper to lower plant
1920 Frits Went isolated the phototropic hormone from oat caleoptiles by removing their tip and placing on algar blocks
Normal growth when block placed on removed tip
Normal growth when block placed on removed tip
Substance diffused from tip to agar to decapitated tip
LIST SEVERAL WAYS EACH OF THESE HORMONES AFFECTS PLANT GROWTH AND DEVELOPMENT: AUXIN, GIBBERELLINS, CYTOKININS, ETHYLENE, AND ABSCISIC ACID
Auxin involved with cell elongation; tropisms Gibberellins are involved in stem elongation, flowering, and germination Cytokinins promote cell division and differentiation Ethylene plays role in ipening fruits; apical dominance; leaf abscission; wound response Abscisic Acid is a envir…
Auxin involved with cell elongation; tropisms
Apical dominance is the inhibition of axillary buds by the apical meristem and fruit development Also stimulates root development and stem cuttings
Cytokinins promote cell division and differentiation
Delay senescence which is the natural aging process; it interacts with auxin and ethylene in apical dominance Induces cell division in tissue culture where cells are isolated from plants and grown in nutrient medium
Ethylene plays role in ipening fruits; apical dominance; leaf abscission; wound response
Thigmomorphogensis is a developmental response to mechanical stressors like wind and senescence
SUMMARIZE THE ACTIVITIES OF THESE PLANT HORMONES AND HORMONE LIKE SIGNALING MOLECULES: BRASSINOSTEROIDS, JASMONATES, SALICYLIC ACID, SYSTEMIN, AND OLIGOSACCHARINS
Brassinosteroids are involved in several aspects of plant growth and development such as Jasmonates affect several plant processes such as Salicylic Acid triggers systematic acquired resistance that helps defend plants against pathogens and isect pests Systemin is polypeptide stimulate…
Brassinosteroids are involved in several aspects of plant growth and development such as
Cell division, cell elongation, light induced differentiation, seed germination, and vascular development
Jasmonates affect several plant processes such as
Pollen development, root growth, fruit ripening, and senescence Also made in response to prescence of insect pests and disease causing organisms
EXPLAIN HOW VARYING AMOUNTS OF LIGHT AND DARKNESS INDUCE FLOWERING
Photoperiodism is any response of plants to the duration and timing of light and dark
Photoperiodism is any response of plants to the duration and timing of light and dark
Flowering is a photoperiodic response in many plants Short day plants detect the lengthening nghts of late summer and flower at that time Intermediate day plants flower when exposed to days and nights of intermediate length
DESCRIBE THE ROLE OF PHYTOCHROME IN FLOWERING INCLUDING A DISCUSSION OF PHYTOCHROME SINGAL TRANSDUCTION
The photoreceptor in photoperiodism is phytochrome (family of about 5 blue and green pigments)
The photoreceptor in photoperiodism is phytochrome (family of about 5 blue and green pigments)
Each chrome has 2 forms Pr and Pfr named for wavelength they absorb Signal Transduction is the oathway that starts it, when phytochrome in cytoplasm absorbs red light and is converted to active form Pfr which goes into nucleus
Each chrome has 2 forms Pr and Pfr named for wavelength they absorb
Pfr is the active form, triggering or inhibiting physiological responses like flowering, shade avoidance , and light requirement for germination
Signal Transduction is the oathway that starts it, when phytochrome in cytoplasm absorbs red light and is converted to active form Pfr which goes into nucleus
In nucleus the chrome binds to transcription factor PIF3 (phytochrome interacting factor)
DEFINE CIRCADIAN RHYTHM AND GIVE AN EXAMPLE
Circadian rhythm is a regular period in organisms growth that approximates a 24 hour day and is rest by rising and setting sun
Circadian rhythm is a regular period in organisms growth that approximates a 24 hour day and is rest by rising and setting sun
Ex. Opening and closing of stomata and sleep movements
DISTINGUISH BETWEEN PHYTOCHROME AND CRYPTOCHROME
Both are photoreceptors that can interact to regulate similar responses like resetting a biological clock
Both are photoreceptors that can interact to regulate similar responses like resetting a biological clock
Phyto strongly sbosrbs red light Crypto absorbs blue and ultraviolet A light

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