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Antoni van Leeuwenhoek
"Father of Protozoology" and "Father of Bacteriology" -Examined water and visualized tiny animals, fungi, algae, and single celled protozoa; "animalcules"
Carolus Linnaeus
Grouped the 5 categories of microorganisms
5 categories of microorganisms
-Small animals - Fungi - Protozoa - Algae - Prokaryotes
Fungi
eukaryotic, cell walls, get food from other organisms (mold, yeast)
Protozoa
single celled eukaryotes, live in animal hosts
Locomotion in Protozoa
psudopodia cilia flagella
Algae
(unicellular or multicellular) Photosynthetic, categorized by pigmentation, storage products, and cell wall
Prokaryotes
unicellular, NO nuclei reproduce asexually 2 kinds- bacteria & archaea
Viruses
NOT cells, made of protein and DNA/RNA require a host for replication
Principles of microscopy
wavelength, refraction/magnification, resolution/contrast
Refraction
bending of light (radiation)
Magnification
perceived enlargement of an image
Resolution
capability of distinguishing between 2 adjacent objects
Contrast
difference in intensity between 2 objects or an object and a background
Electron microscope limits
can see proteins, ribosomes, viruses
Light microscope limits
hard to see viruses but can see cells
Dark field microscope
light against dark background
Phase contrast microscopes
3D against gray background
Fluorescence microscope
colored against black background
Confocal microscopes
removes out of focus light, can be stacked to make a 3D image
Electron Microscopes
view bacteria, viruses, internal cell structure, molecules and large atoms
Transmission electron microscope
Cross sections of cells/viruses to see internally
Scanning electron microscopes
surface views of organisms
Scanning probe microscopes
see single molecules and large atomic clusters
Staining
increase contrast and resolution with dyes -simple, differential, special
Gram stain
differential stain 1. crystal violet (purple dye) 2. iodine (mordent) 3. alcohol (decolorize) 4. safranin (red dye)
Gram stain turns gram positive what color?
Purple
Gram stain turns gram negative what color?
Pink
Domains of basic types of cells
eukarya bacteria archaea
Prokaryotes
glycocalyces flagella fimbriae and pili
Glycocalyces
gelatin, sticky substance outside of cell -capsule or slime layer
Capsule
firmly attached to cell, protects from drying out
Slime layer
loosely attached to cell, protects from drying out, allows prokaryotes to attach to surfaces
Flagella-prokaryotes
movement, whiplike tail, rotary movements (boat propeller)
Flagella structure/function-prokaryotes
filament, hook, basal body runs and tumbles
Nonmotile extensions-prokaryotes
fimbriae pili
Fimbriae
sticky protein, stick out of cell wall for adherence typically hundreds cover the cell
Pili
long hollow tubules, mediate transfer of DNA from cell to cell, bacteria typically have 1-2
Prokaryotic Cell Walls
structure, shape, protection
Bacterial Cell Walls
made of peptidoglycan, NAG and NAM sugars Two types: Gram + and Gram -
Gram Positive Cell Walls
Thick peptidoglycan layer -turns purple
Gram Negative Cell Walls
Thin peptidoglycan layer -turns pink
Passive Transport
no ATP -simple diffusion, osmosis, facilitated diffusion
Facilitated diffusion
need a protein carrier/channel
Active transport
Need ATP and carrier protein to go AGAINST the concentration gradient
Uniporter
single molecule transport
Antiporter
move multiple molecules in opposite directions
symporter
move multiple molecules in same direction
Prokaryotic cell membrane
lipid bilayer, semipermeable
Cytoplasm-Prokaryotes
contains all intracellular materials within the cell membrane
Cytosol
fluid in the cytoplasm
Shapes of Prokaryotic cells
spherical, rodlike, bent rods, corkscrew, variable
Spherical
coccus
Rodlike
bacillus
Corkscrew
spirillum
Bent rods
vibrio
Variable shape
pleomorphic
Cell walls of plants, algae, fungas
cellulose, agar, chitin
Where is RNA synthesized
in nucleoli (nucleus)
Where are lipids synthesized
smooth ER
What transports proteins produced by ribosomes to the golgi
Rough ER
What recieves, processes and packages proteins for transport
Golgi
Produces ATP for the cell
Mitochondria
Region of cytoplasm where the centrioles are
centrosome
What stores light energy
chloroplasts
What breaks down cellular garbage
lysosomes
what contains enzymes for degrading wastes
peroxisomes
vacuoles/vesicles do what?
store and transfer nutrients
What is the sum of all chemical reactions required for growth and reproduction
metabolism
Minimum requirements for cells
energy, carbon, nitrogen, water, ions
Why do cells need energy (5 reasons)
locomotion reporduction storage energy production growth
What are light energy requirements called
phototrophs
what are chemical energy requirements called
chemotrophs
Carbon requirements that make their own food
autotrophs
Carbon requirements that feed on other organisms
heterotrophs
Build small to big molecules in a reaction ATP to ADP + P
anabolic reaction
breakdown big molecules to small in a reaction ADP + P to ATP
catabolic
What reactions are always coupled and move electrons
redox reactions (reduction and oxidation)
What reaction involves loss of electrons
oxidation
what reaction involves gain of electrons
reduction
What involves ATP being made by releasing energy in the form of electrons from organic to inorganic compounds
reduction and oxidation
Low energy electron carriers
oxidized
high energy electron carriers
reduced
the primary electron carriers for temporary storage of energy derived from redox reactions
NAD + NADP + FAD
Redox reactions process
make ATP, break down to release energy, move energy
The saturation point of enzymatic activity
can't complete the reaction any faster
What is the breakdown of glucose (6 carbon sugar) into 2 three carbon pyruvates
glycolysis
What is glycolysis with a twist (different set of enzymes)
Entner Doudoroff Pathway
Aerobic respiration involves what
breakdown of organic energy into CO2 and water that REQUIRES oxygen
3 stages of aerobic respiration
pyruvate oxidation krebs cycle (citric acid) electron transport chain
prokaryotic flagella structure
run and tumble, propeller, hook & basal body, external structure, made of flagellin
eukaryotic flagella structure
inside cell, wave motion, made of tubulin
endospores-prokaryotes
dormancy structures use a defense strategy to last a long time
Prokaryotic cell division mechanisms (3)
binary fission snapping divison budding
What cell division is how most prokaryotes divide and replicates DNA then separates the two copies and divides in half
binary fission
What creates attached forms of cells with portions of cell wall still attached in two daughter cells
snapping division
Types of snapping division arrangements
v shaped palisade arrangement
What copies genetic info and pushes it into a bud that pinches off
budding
Eukaryotic cell membrane
contains cholesterol and steroid derived lipids
eukaryotic cell walls
rigid and made of polysaccharides
external structure of eukaryotic cells
ECM, flagella, cilia

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