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Rice BIOE 301 - Lecture Notes

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BIOE 301Bioengineering and Prostate CancerChallenge: Should we screen?Cost of screeningSlide 5Efficacy of screeningWhy are RCTs so Important? Lead Time BiasSlide 8Should we screen?Screening guidelinesDo All Countries Screen with PSA?Bioengineering and Ovarian CancerStatistics on Ovarian CancerGlobal Burden of Ovarian CancerRisk factorsPathophysiologyScreening of Ovarian CancerTransvaginal SonographyDiagnostic LaparoscopyDetection and TreatmentScreening ScenariosSlide 22Slide 23Slide 24Does Ultrasound Screening Work?Ongoing Clinical TrialsOvarian CancerChallengeCancer Screening ExamsLets play…Here’s how to play:Slide 32Slide 33Slide 34Slide 35Slide 36Slide 37Slide 38Proteomics: Mass SpectrometerData AnalysisOvaCheckSlide 42Comparative AnalysisSlide 44ResponseDr. Koop, where were you?Slide 47Slide 48Slide 49Slide 50Slide 51Slide 52Slide 53DNA MicroarrayNew screening technologiesBIOE202: Advances in bioengineeringNext TimeBIOE 301Lecture FifteenDavid J. [email protected] Hours: Mon 1-4 PMRisk factorsDetectionTreatmentNew technologiesChallengesBioengineering and Prostate CancerChallenge: Should we screen?Costs Efficacy of screeningDRE/PSA test $30-100Prostate biopsy$700-1500Cost of screeningScreening Performance:Se = 73%; Sp = 90%Number Tested:N=1,000,000; Prevalence = 2% Costs:Screening = $30; Follow up biopsy = $1500What is detection cost?What is cost/cancer found?Test PositiveTest NegativeDisease Present14,600 5,400 # with Disease = 20,000Disease Absent98,000 882,000 #without Disease = 980,000# Test Pos = 112,600# Test Neg = 887,400Total Tested = 1,000,000Cost to Detect =$30*1,000,000+$1500*112,600 =$168,900,000 Cost/Cancer = $168,900,000/14,600=$13,623Efficacy of screeningDRE Case studiesMixed resultsPSA test Mortality decreased 42% since 1993 in Tyrol, AustriaRCT’sERSPCPLCOWhy are RCTs so Important?Lead Time BiasShould we screen?Yes:Localized prostate cancer is curableAdvanced prostate cancer is fatalSome studies (not RCTs) show decreased mortality in screened patientsNo:False-positives lead to unnecessary biopsiesOver-detection of latent cancersWe will detect many cancers that may never have produced symptoms before patients died of other causes (slow growing cancer of old age)No RCTs showing decreased mortalityScreening guidelinesDo All Countries Screen with PSA?United States:Conflicting recommendationsEurope:NoNot enough evidence that screening reduces mortalityBioengineering and Ovarian CancerStatistics on Ovarian CancerUnited States:Incidence: 22,430Mortality: 15,280Worldwide:Incidence: 190,000Mortality: 114,000Global Burden of Ovarian CancerRisk factorsAgeMost ovarian cancers develop after menopause Personal or family history of breast, ovarian, endometrial, prostate or colon cancer.Reproductive history Increases with the more lifetime cycles of ovulation that awoman has undergone. Thus, women who haveundergone hormonal treatment for infertility, never usedbirth control pills, and who never became pregnant are athigher risk for ovarian cancerPathophysiologyScreening of Ovarian CancerPelvic and rectal examCA125 testTransvaginal sonographyTransvaginal SonographyDiagnostic LaparoscopyComplication Rate = 0.5 – 1%Detection and TreatmentScreeningPelvic examCA125 testTransvaginal ultrasoundDiagnosisDiagnostic laparoscopyTreatment:Surgery, radiation therapy, chemotherapy5 year survivalLocalized disease: 93% (20% diagnosed at this stage)Screening ScenariosScenario #1:Screen 1,000,000 women with CA125p = .0001 (100 cancers)Se=35%, Sp=98.5%Cost = $30Follow with laparoscopyComplication rate = 1%Cost=$2,000TP=35 FP=14,999 Complications=150 PPV =0.23% NPV =99.99%Cost per cancer found = $1,716,200Screening ScenariosScenario #2:Screen 1,000,000 women with transvaginal USP = .0001 (100 cancers)Se=100%, Sp=96%Cost = $150Follow with laparoscopyComplication rate = 1%Cost=$2,000TP=100 FP=39,996 Complications=401 PPV =0.25% NPV =100%Cost per cancer found = $300,672Screening ScenariosScenario #3:Screen 1,000,000 women >age 50 with TVUSP = .0005 (500 cancers)Se=100%, Sp=96%Cost = $150Follow with laparoscopyComplication rate = 1%Cost=$2,000TP=500 FP=39,980 Complications=405 PPV =1.24% NPV =100%Cost per cancer found = $60,670Screening ScenariosScenario #3 cont.:Screen 1,000,000 women > age 50 with TVUSP = .0005 (500 cancers)Se=100%, Sp=??%Cost = $150How high does Sp need to be for PPV to reach 25%?Sp = 99.985%Does Ultrasound Screening Work?Two studies of over 10,000 low-risk women:The positive predictive value was only 2.6%Ultrasound screening of 100,000 women over age 45 would:Detect 40 cases of ovarian cancer, Result in 5,398 false positives Result in over 160 complications from diagnostic laparoscopyJacobs I. Screening for early ovarian cancer. Lancet; 2:171-172, 1988.Ongoing Clinical TrialsUnited Kingdom200,000 postmenopausal womenCA 125Qlevel plus transvaginal ultrasound examination Transvaginal ultrasound alone No screeningUnited States:37,000Qwomen (aged 55–74)Annual CA 125Qlevel and transvaginal ultrasound examinationNo screeningEurope:120,000 postmenopausal womenNo screening, Transvaginal ultrasound at intervals of 18 monthsTransvaginal ultrasound at intervals of 3Qyearshttp://www.mja.com.au/public/issues/178_12_160603/and10666_fm.pdfRisk factorsDetectionTreatmentChallengesNew technologiesOvarian CancerChallengeBetter screening methods to detect early stages of ovarian cancerCancer Screening ExamsCellular/Morphological MarkersPap smearSerum protein markersPSACA125DNA markersHPV DNALets play…Where in the World is C. Everett Koop?How do we choose a target?Here’s how to play:Take a good look at each of the following pictures and try to spot C. Everett Koop.A. He is in a mitochondria.B. He is on a nucleus.C. He is on a chromosome.A. He is behind endoplasmic reticulum.B. He is behind a Golgi apparatus.C. He is behind a vacuole.A. He is on a protein.B. He is on a gene.C. He is on a chromosome.A. He is in helicase.B. He is in a nuclear pore.C. He is on a ribosome.A. He is on DNA.B. He is on a protein.C. He is on RNAA. He is on a sea turtle.B. He is on a


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