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Simecol

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simecol-packageaddtoenvapproxTimeas.simObjCAchemostatconwaydiffusioneightneighboursfitOdeModelfixParmsfromtobyinitialize-methodsiterationlistOrNULL-classlvlv3mixNamedVecneighboursobserverodeModelp.constrainparmspcuseriespeaksplot-methodsprint-methodssEditseedfillsim-methodsssqOdeModelupcaIndexPackage ‘simecol’July 2, 2014Version 0.8-4Date 2013-09-15Title Simulation of ecological (and other) dynamic systemsAuthor Thomas PetzoldtDepends R (>= 2.14), deSolve, methodsSuggests tcltk, FME, latticeLazyLoad yesMaintainer Thomas Petzoldt <[email protected]>Description simecol is an object oriented framework to simulateecological (and other) dynamic systems. It can be used fordifferential equations, individual-based (or agent-based) and othermodels as well. The package helps to organize scenarios (avoids copyand paste) and improves readability and usability of code.License GPL (>= 2)URL http://www.simecol.de/Repository CRANRepository/R-Forge/Project simecolRepository/R-Forge/Revision 233Repository/R-Forge/DateTimeStamp 2013-09-15 19:31:06Date/Publication 2013-09-26 16:46:19NeedsCompilation yes12 simecol-packageR topics documented:simecol-package . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2addtoenv . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6approxTime . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7as.simObj . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8CA . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9chemostat . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11conway . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12diffusion . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14eightneighbours . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16fitOdeModel . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 17fixParms . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 21fromtoby . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 22initialize-methods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 23iteration . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 24listOrNULL-class . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26lv . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 27lv3 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 28mixNamedVec . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 30neighbours . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 31observer . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 34odeModel . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 36p.constrain . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 38parms . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 40pcuseries . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 42peaks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 43plot-methods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . …


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